RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TSC22D1Q15714 1073 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 NIPAL3Q6P499 406 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 PODNL1Q6PEZ8 512 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF730Q6ZMV8 503 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 MBOAT2Q6ZWT7 520 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 HIST3H2AQ7L7L0 130 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 PIWIL3Q7Z3Z3 882 aaKnown RBP11.96□□□□□ -0.49
COL1A1-208ENST00000494334 PXKQ7Z7A4 578 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 ZDHHC21Q8IVQ6 265 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 UEVLDQ8IX04 471 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 UBE2J2Q8N2K1 259 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 FAM222BQ8WU58 562 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 HIST1H2ACQ93077 130 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 BPIFA2Q96DR5 249 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 C14orf79Q96F83 325 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 LRGUKQ96M69 825 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 DACH2Q96NX9 599 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 HDHD5Q9BXW7 423 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 SLC7A10Q9NS82 523 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 TESMINQ9Y4I5 508 aa11.96□□□□□ -0.49
COL1A1-208ENST00000494334 UTP20O75691 2785 aaKnown RBP11.96□□□□□ -0.5
COL1A1-208ENST00000494334 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 HTR3EA5X5Y0 456 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 CYSRT1A8MQ03 144 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 C11orf98E9PRG8 122 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 BLOC1S5-TXNDC5H3BN57 136 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 PDLIM1O00151 329 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 OR6A2O95222 327 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 TSPAN19P0C672 248 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 COX5AP20674 150 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 MAKP20794 623 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 MAGEA2P43356 314 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 FOXG1P55316 489 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-208ENST00000494334 POU3F1Q03052 451 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-208ENST00000494334 FAPQ12884 760 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 RRM2BQ7LG56 351 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 NANOGNBQ7Z5D8 188 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 MEX3DQ86XN8 651 aaKnown RBP11.95□□□□□ -0.5
COL1A1-208ENST00000494334 OR52J3Q8NH60 311 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 POP5Q969H6 163 aaKnown RBP11.95□□□□□ -0.5
COL1A1-208ENST00000494334 TXNDC15Q96J42 360 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 FUZQ9BT04 418 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 ACTR6Q9GZN1 396 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 OR10A4Q9H209 315 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 SLCO5A1Q9H2Y9 848 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 MAGIXQ9H6Y5 334 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 ASB6Q9NWX5 421 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 MED29Q9NX70 200 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 UPB1Q9UBR1 384 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 MALT1Q9UDY8 824 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 SLC7A8Q9UHI5 535 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 POMPQ9Y244 141 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 RCE1Q9Y256 329 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 NOX1Q9Y5S8 564 aa11.95□□□□□ -0.5
COL1A1-208ENST00000494334 AQP12BA6NM10 295 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 RNF13O43567 381 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 UPK3AO75631 287 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 SERPINI2O75830 405 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 LYZL6O75951 148 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 GADD45GO95257 159 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 PPP3CBP16298 524 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 RRM2P31350 389 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 AQP2P41181 271 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 SMIM11AP58511 58 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 SPIBQ01892 262 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 TLE4Q04727 773 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 CHRNB3Q05901 458 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 RPL18Q07020 188 aaKnown RBP11.94□□□□□ -0.5
COL1A1-208ENST00000494334 LGALS3BPQ08380 585 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 FLOT2Q14254 428 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 LAPTM4AQ15012 233 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 DAZAP2Q15038 168 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-208ENST00000494334 SEC23BQ15437 767 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 FAM98BQ52LJ0 330 aaKnown RBP11.94□□□□□ -0.5
COL1A1-208ENST00000494334 FGD3Q5JSP0 725 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 BHLHA15Q7RTS1 189 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-208ENST00000494334 WDFY1Q8IWB7 410 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 AQP12AQ8IXF9 295 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 ZNF433Q8N7K0 673 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-208ENST00000494334 POMGNT2Q8NAT1 580 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 STEAP2Q8NFT2 490 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 KISS1RQ969F8 398 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-208ENST00000494334 S100PBPQ96BU1 408 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 MED18Q9BUE0 208 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 EMC6Q9BV81 110 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 TRIM15Q9C019 465 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 LRMDAQ9H2I8 198 aa11.94□□□□□ -0.5
COL1A1-208ENST00000494334 FAM221AA4D161 298 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 SLC35F4A4IF30 521 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 OR6C65A6NJZ3 312 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 EFCAB9A8MZ26 197 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 CASKO14936 926 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 SLC43A1O75387 559 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 THBDP07204 575 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 ITGA5P08648 1049 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 IFNGR1P15260 489 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 IL32P24001 234 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms