RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 SLC25A3Q00325 362 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 ROR2Q01974 943 aaKnown RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 POU3F1Q03052 451 aaPredicted RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 LGALS3BPQ08380 585 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 SPOCK1Q08629 439 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 PMS2P3Q13401 168 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 TBRG1Q3YBR2 411 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 ARPINQ7Z6K5 226 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 RBM45Q8IUH3 476 aaKnown RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 POU5F2Q8N7G0 328 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 PIK3C3Q8NEB9 887 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 OR4D11Q8NGI4 311 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 RCN3Q96D15 328 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 TRMT61AQ96FX7 289 aaKnown RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 SLC41A3Q96GZ6 507 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 C1QTNF6Q9BXI9 259 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 MRPL39Q9NYK5 338 aaKnown RBP13.22□□□□□ -0.29
USP39-217ENST00000491659 SLC7A7Q9UM01 511 aa13.22□□□□□ -0.29
USP39-217ENST00000491659 ZNF432O94892 652 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 PAX7P23759 505 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 CRYBA2P53672 197 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 LTBQ06643 244 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 PUDPQ08623 228 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 LRRC23Q53EV4 343 aaPredicted RBP13.21□□□□□ -0.29
USP39-217ENST00000491659 AGAP6Q5VW22 663 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 BIVMQ86UB2 503 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 CARM1Q86X55 608 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 ANKK1Q8NFD2 765 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 OR2T12Q8NG77 320 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 OR5J2Q8NH18 312 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 BOD1Q96IK1 185 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 MPP4Q96JB8 637 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 ZNF583Q96ND8 569 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 MOGAT1Q96PD6 335 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 DHRS9Q9BPW9 319 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 BDH2Q9BUT1 245 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 TRAF4Q9BUZ4 470 aaPredicted RBP13.21□□□□□ -0.29
USP39-217ENST00000491659 PCDHAC1Q9H158 963 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 FKRPQ9H9S5 495 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 AP3M1Q9Y2T2 418 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 SH3GLB1Q9Y371 365 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 NOX1Q9Y5S8 564 aa13.21□□□□□ -0.29
USP39-217ENST00000491659 CADP27708 2225 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 LRRN3E7EW58 273 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 MS4A18H0YCH9 400 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 RPL36A-HNRNPH2H7BZ11 118 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 KPNA4O00629 521 aaPredicted RBP13.2□□□□□ -0.3
USP39-217ENST00000491659 OR6A2O95222 327 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 HPRP00739 348 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 INHBBP09529 407 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 COX4I1P13073 169 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 AHCYP23526 432 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 CDKN1AP38936 164 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 TAS2R41P59536 307 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 MS4A18Q3C1V0 323 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 ANKRD16Q6P6B7 361 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 LINC00114Q6XXX2 140 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 WDR88Q6ZMY6 472 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 DEF8Q6ZN54 512 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 MICU2Q8IYU8 434 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
USP39-217ENST00000491659 OR2M2Q96R28 347 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 KCNS3Q9BQ31 491 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 SLC19A3Q9BZV2 496 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
USP39-217ENST00000491659 POLR2J3Q9H1A7 115 aaKnown RBP13.2□□□□□ -0.3
USP39-217ENST00000491659 MOV10Q9HCE1 1003 aaKnown RBP13.2□□□□□ -0.3
USP39-217ENST00000491659 B3GAT2Q9NPZ5 323 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 USP22Q9UPT9 525 aa13.2□□□□□ -0.3
USP39-217ENST00000491659 HEATR1Q9H583 2144 aaKnown RBP13.19□□□□□ -0.3
USP39-217ENST00000491659 A0A096LPE4 126 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 ARPC4-TTLL3A0A0A6YYG9 625 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 A0A1W2PPZ6 126 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 ELOVL7A1L3X0 281 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 FAM171A2A8MVW0 826 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 E7EQL1 145 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 H7C1Q1 480 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 OVOL3O00110 214 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 PLPP3O14495 311 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 SERPINI2O75830 405 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 LYPD3O95274 346 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 CH25HO95992 272 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 THY1P04216 161 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 ADORA3P0DMS8 318 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 UMPSP11172 480 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 ETFDHQ16134 617 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 ZNF74Q16587 644 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 CARD17Q5XLA6 110 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 SPATA21Q7Z572 469 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 PXKQ7Z7A4 578 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 DTX2Q86UW9 622 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 TMEM123Q8N131 208 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 FBXL14Q8N1E6 418 aa13.19□□□□□ -0.3
USP39-217ENST00000491659 BCL2L2Q92843 193 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms