RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TIFABQ6ZNK6 161 aa2.53□□□□□ -2
CD46-216ENST00000490278 MDS2Q8NDY4 140 aa2.53□□□□□ -2
CD46-216ENST00000490278 NPBQ8NG41 125 aa2.53□□□□□ -2
CD46-216ENST00000490278 OR51G1Q8NGK1 321 aa2.53□□□□□ -2
CD46-216ENST00000490278 OR10G9Q8NGN4 311 aa2.53□□□□□ -2
CD46-216ENST00000490278 OR1L4Q8NGR5 311 aa2.53□□□□□ -2
CD46-216ENST00000490278 PYROXD1Q8WU10 500 aa2.53□□□□□ -2
CD46-216ENST00000490278 SRSF12Q8WXF0 261 aaKnown RBP2.53□□□□□ -2
CD46-216ENST00000490278 FGF14Q92915 247 aa2.53□□□□□ -2
CD46-216ENST00000490278 IL22RA2Q969J5 263 aa2.53□□□□□ -2
CD46-216ENST00000490278 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.53□□□□□ -2
CD46-216ENST00000490278 FAM210BQ96KR6 192 aa2.53□□□□□ -2
CD46-216ENST00000490278 NPY6RQ99463 290 aa2.53□□□□□ -2
CD46-216ENST00000490278 ZBTB18Q99592 522 aa2.53□□□□□ -2
CD46-216ENST00000490278 PELOQ9BRX2 385 aaKnown RBP2.53□□□□□ -2
CD46-216ENST00000490278 TRIM62Q9BVG3 475 aa2.53□□□□□ -2
CD46-216ENST00000490278 GON7Q9BXV9 100 aa2.53□□□□□ -2
CD46-216ENST00000490278 SRMSQ9H3Y6 488 aa2.53□□□□□ -2
CD46-216ENST00000490278 NIPAL2Q9H841 368 aa2.53□□□□□ -2
CD46-216ENST00000490278 FN3KRPQ9HA64 309 aa2.53□□□□□ -2
CD46-216ENST00000490278 SGK2Q9HBY8 427 aa2.53□□□□□ -2
CD46-216ENST00000490278 N6AMT1Q9Y5N5 214 aa2.53□□□□□ -2
CD46-216ENST00000490278 PHF3Q92576 2039 aaKnown RBP2.52□□□□□ -2.01
CD46-216ENST00000490278 KIR2DL5BA0A0G2JN68 375 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 KIR2DL5BA0A0G2JPC4 375 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 RIPK2O43353 540 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 PCCAP05165 728 aaPredicted RBP2.52□□□□□ -2.01
CD46-216ENST00000490278 CD1CP29017 333 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 SLC26A3P40879 764 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 SEC61GP60059 68 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 ACVR1Q04771 509 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 PDIA2Q13087 525 aaKnown RBP2.52□□□□□ -2.01
CD46-216ENST00000490278 DGUOKQ16854 277 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 IMMTQ16891 758 aaKnown RBP2.52□□□□□ -2.01
CD46-216ENST00000490278 LRRC10Q5BKY1 277 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 OR2A2Q6IF42 318 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 FRMPD2BQ6IN97 320 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 Q6P435 159 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 UQCC3Q6UW78 93 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 PIANPQ8IYJ0 282 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 KIR2DL5AQ8N109 375 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 KIR2DL5BQ8NHK3 375 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 FAM110BQ8TC76 370 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 ACER1Q8TDN7 264 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 RNF185Q96GF1 192 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 TCEANC2Q96MN5 208 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 CNN2Q99439 309 aaKnown RBP2.52□□□□□ -2.01
CD46-216ENST00000490278 PPA2Q9H2U2 334 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 LY9Q9HBG7 655 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 NMRAL1Q9HBL8 299 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 MRPL47Q9HD33 250 aaKnown RBP2.52□□□□□ -2.01
CD46-216ENST00000490278 SLC25A37Q9NYZ2 338 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 WSB1Q9Y6I7 421 aa2.52□□□□□ -2.01
CD46-216ENST00000490278 KANK1Q14678 1352 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 OR52A4PA6NMU1 304 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 PES1O00541 588 aaKnown RBP2.51□□□□□ -2.01
CD46-216ENST00000490278 SLC31A2O15432 143 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 B4GALT2O60909 372 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 FGF1P05230 155 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 PNMA6AP0CW24 399 aaPredicted RBP2.51□□□□□ -2.01
CD46-216ENST00000490278 CALRP27797 417 aaKnown RBP2.51□□□□□ -2.01
CD46-216ENST00000490278 FDFT1P37268 417 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 CDH4P55283 916 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 MRPL28Q13084 256 aaKnown RBP2.51□□□□□ -2.01
CD46-216ENST00000490278 PSG5Q15238 335 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 ZMYND11Q15326 602 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 AGBL2Q5U5Z8 902 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 KDELC1Q6UW63 502 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 ZNF621Q6ZSS3 439 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 H2BFWTQ7Z2G1 175 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 C6orf120Q7Z4R8 191 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 TGIF2LXQ8IUE1 241 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 TPRX1Q8N7U7 411 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 VN1R2Q8NFZ6 395 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 OR4F15Q8NGB8 312 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 OR8J1Q8NGP2 316 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 OR1N2Q8NGR9 330 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 MCOLN3Q8TDD5 553 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 SMARCD2Q92925 531 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 FAM104AQ969W3 186 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 IFT74Q96LB3 600 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 PANX2Q96RD6 677 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 FMO2Q99518 471 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 FAIM2Q9BWQ8 316 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 ANKRD19PQ9H560 264 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 CLMPQ9H6B4 373 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 CALYQ9NYX4 217 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 COX16Q9P0S2 106 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 PRO0461Q9UI25 63 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 TRAPPC4Q9Y296 219 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 NPTNQ9Y639 398 aa2.51□□□□□ -2.01
CD46-216ENST00000490278 IGLV3-22A0A075B6J6 115 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 IGHV3-64DA0A0J9YX35 117 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 FAM240BA0A1B0GVZ2 78 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 BTBD17A6NE02 478 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 HAS3O00219 553 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 LAD1O00515 517 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 OR7A10O76100 309 aa2.5□□□□□ -2.01
CD46-216ENST00000490278 SLC25A27O95847 323 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms