RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 IGHV4-34P06331 123 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 ATP1B2P14415 290 aaPredicted RBP2.14□□□□□ -2.07
RFC4-213ENST00000489028 HTR1FP30939 366 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 RFC4P35249 363 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 ATP5OP48047 213 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 CDK16Q00536 496 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 GBE1Q04446 702 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 CCDC173Q0VFZ6 552 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 SPANXN2Q5MJ10 180 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 SAMD4BQ5PRF9 694 aaKnown RBP2.14□□□□□ -2.07
RFC4-213ENST00000489028 TMEM107Q6UX40 140 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 LRRC74BQ6ZQY2 392 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 CENPQQ7L2Z9 268 aaPredicted RBP2.14□□□□□ -2.07
RFC4-213ENST00000489028 NUDCD3Q8IVD9 361 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 ZNF786Q8N393 782 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 BBOF1Q8ND07 529 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 CATSPER1Q8NEC5 780 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 OR1E3Q8WZA6 343 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 ST8SIA1Q92185 356 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 STMN2Q93045 179 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 MCUR1Q96AQ8 359 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 RPUSD4Q96CM3 377 aaKnown RBP2.14□□□□□ -2.07
RFC4-213ENST00000489028 TSNARE1Q96NA8 513 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 RNF2Q99496 336 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 SRXN1Q9BYN0 137 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 ANKRD19PQ9H560 264 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 EXO5Q9H790 373 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 NIPAL2Q9H841 368 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 CYTL1Q9NRR1 136 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 KLHL28Q9NXS3 571 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 PSMC3IPQ9P2W1 217 aaPredicted RBP2.14□□□□□ -2.07
RFC4-213ENST00000489028 ZNF223Q9UK11 482 aaPredicted RBP2.14□□□□□ -2.07
RFC4-213ENST00000489028 TTC21BQ7Z4L5 1316 aa2.14□□□□□ -2.07
RFC4-213ENST00000489028 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 A0A1W2PPE3 182 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 TCRBV9S1A1TA0A576 114 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 SMCO3A2RU48 225 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 VSTM2BA6NLU5 285 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 FAM166BA8MTA8 275 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 A8MUA0 341 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 C9JVG2 144 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 RNF13O43567 381 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 OXSR1O95747 527 aaPredicted RBP2.13□□□□□ -2.07
RFC4-213ENST00000489028 CRYGBP07316 175 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 CHMLP26374 656 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 SYKP43405 635 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 VGLL4Q14135 290 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 GK3PQ14409 553 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 GNMTQ14749 295 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 DUSP7Q16829 419 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 XKR7Q5GH72 579 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 RAET1LQ5VY80 246 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 OR52E8Q6IFG1 317 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 WDR74Q6RFH5 385 aaPredicted RBP2.13□□□□□ -2.07
RFC4-213ENST00000489028 UQCC3Q6UW78 93 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 LRRC31Q6UY01 552 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 RNF165Q6ZSG1 346 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 PGAP1Q75T13 922 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 TPRX1Q8N7U7 411 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 OR4C5Q8NGB2 326 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 OR56B4Q8NH76 319 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 BLOC1S5Q8TDH9 187 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 PAQR8Q8TEZ7 354 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 UFD1Q92890 307 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 CNN2Q99439 309 aaKnown RBP2.13□□□□□ -2.07
RFC4-213ENST00000489028 FMO2Q99518 471 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 CHP1Q99653 195 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 GAL3ST1Q99999 423 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 CENPKQ9BS16 269 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 ILKAPQ9H0C8 392 aaPredicted RBP2.13□□□□□ -2.07
RFC4-213ENST00000489028 PPA2Q9H2U2 334 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 NTN4Q9HB63 628 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 NEK6Q9HC98 313 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 PISDQ9UG56 409 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 DCDC2Q9UHG0 476 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 ZNF225Q9UK10 706 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 SH3TC1Q8TE82 1336 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 ATP10AO60312 1499 aa2.13□□□□□ -2.07
RFC4-213ENST00000489028 PLEKHH1Q9ULM0 1364 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 OR5B21A6NL26 309 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 LOC110117498-PIK3R3F6TDL0 507 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 WRBO00258 174 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 DCTN6O00399 190 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 CASQ2O14958 399 aaPredicted RBP2.12□□□□□ -2.07
RFC4-213ENST00000489028 CACNG3O60359 315 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 TOM1O60784 492 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 WISP3O95389 354 aaPredicted RBP2.12□□□□□ -2.07
RFC4-213ENST00000489028 TMEM50AO95807 157 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 CST1P01037 141 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 MMP1P03956 469 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 PABPC4LP0CB38 370 aaKnown RBP2.12□□□□□ -2.07
RFC4-213ENST00000489028 IFNA8P32881 189 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 HSD17B2P37059 387 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 OPRD1P41143 372 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 PTGDSP41222 190 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 PLP1P60201 277 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 ENPEPQ07075 957 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 TGM3Q08188 693 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 SCRN3Q0VDG4 424 aa2.12□□□□□ -2.07
RFC4-213ENST00000489028 IL18Q14116 193 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms