RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 UPB1Q9UBR1 384 aa12.46□□□□□ -0.41
COL9A2-208ENST00000488463 EDARQ9UNE0 448 aa12.46□□□□□ -0.41
COL9A2-208ENST00000488463 A0A1W2PR80 420 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 RPL36A-HNRNPH2H7BZ11 118 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 HS3ST1O14792 307 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 DCTN3O75935 186 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 OR5F1O95221 314 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF43P17038 809 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 HOXC12P31275 282 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 CLDN17P56750 224 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 PSME3P61289 254 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 SELENOWP63302 87 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 PIN1Q13526 163 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 LRRC23Q53EV4 343 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 OR7E24Q6IFN5 339 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 NIPAL3Q6P499 406 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 C20orf204Q6ZNR8 217 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 NKAIN4Q8IVV8 208 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 C17orf78Q8N4C9 275 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 LRRC17Q8N6Y2 441 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF611Q8N823 705 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 OR52N5Q8NH56 324 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 RNF217Q8TC41 542 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 ALKBH3Q96Q83 286 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 OR2M2Q96R28 347 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 SLC19A3Q9BZV2 496 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 POLR2J3Q9H1A7 115 aaKnown RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 ALG2Q9H553 416 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 ESRP2Q9H6T0 727 aaKnown RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 NGBQ9NPG2 151 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 BEX4Q9NWD9 120 aaPredicted RBP12.45□□□□□ -0.42
COL9A2-208ENST00000488463 A4GNTQ9UNA3 340 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 RNF115Q9Y4L5 304 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 SNX13Q9Y5W8 968 aa12.45□□□□□ -0.42
COL9A2-208ENST00000488463 CIB4A0PJX0 185 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 SHISA9B4DS77 424 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 CXCR6O00574 342 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 IFNA14P01570 189 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 ASAH2BP0C7U1 165 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 DANCRP0C864 163 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 GTF2E2P29084 291 aaKnown RBP12.44□□□□□ -0.42
COL9A2-208ENST00000488463 UGT2B15P54855 530 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 ADAM8P78325 824 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 PUDPQ08623 228 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 FXNQ16595 210 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 HIKESHIQ53FT3 197 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 DEF8Q6ZN54 512 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 CBLL1Q75N03 491 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 TSEN54Q7Z6J9 526 aaKnown RBP12.44□□□□□ -0.42
COL9A2-208ENST00000488463 VTCN1Q7Z7D3 282 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 ANKK1Q8NFD2 765 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 KBTBD8Q8NFY9 601 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 OR1K1Q8NGR3 316 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 OR5J2Q8NH18 312 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 AKAP1Q92667 903 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL9A2-208ENST00000488463 BCL2L2Q92843 193 aaPredicted RBP12.44□□□□□ -0.42
COL9A2-208ENST00000488463 MUCL1Q96DR8 90 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
COL9A2-208ENST00000488463 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 TMUB1Q9BVT8 246 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 TAS2R5Q9NYW4 299 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 RIMS3Q9UJD0 308 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 CSPG4Q6UVK1 2322 aa12.44□□□□□ -0.42
COL9A2-208ENST00000488463 FFAR1O14842 300 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 PRSS23O95084 383 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 CH25HO95992 272 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 IGF2P01344 180 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 CD3EP07766 207 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 TSPAN19P0C672 248 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 THRBP10828 461 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
COL9A2-208ENST00000488463 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL9A2-208ENST00000488463 ZP4Q12836 540 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 PMS2P3Q13401 168 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF672Q499Z4 452 aaPredicted RBP12.43□□□□□ -0.42
COL9A2-208ENST00000488463 TTC33Q6PID6 262 aaPredicted RBP12.43□□□□□ -0.42
COL9A2-208ENST00000488463 PXKQ7Z7A4 578 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 TGIF2LYQ8IUE0 185 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 TMEM255BQ8WV15 326 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 ASPNQ9BXN1 380 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 FKRPQ9H9S5 495 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 MAN2C1Q9NTJ4 1040 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 C20orf141Q9NUB4 165 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 ARL8BQ9NVJ2 186 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 MED29Q9NX70 200 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 NOX1Q9Y5S8 564 aa12.43□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 KPNA4O00629 521 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 CLOCKO15516 846 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 SLC43A1O75387 559 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 MT-ND1P03886 318 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 PAX1P15863 534 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 CD40P25942 277 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms