RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 NCBP2P52298 156 aaKnown RBP eCLIP1.41□□□□□ -2.186e-34■■■■■ 154.9
SMC4-219ENST00000487747 PDIA2Q13087 525 aaKnown RBP1.41□□□□□ -2.18
SMC4-219ENST00000487747 TTLL9Q3SXZ7 439 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 LINC00336Q6ZUF6 198 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 SNX32Q86XE0 403 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 TICAM2Q86XR7 235 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 GATSQ8NAP1 163 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 OR52B4Q8NGK2 314 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 C14orf79Q96F83 325 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 THAP9Q9H5L6 903 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 IL26Q9NPH9 171 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 ANKRD12Q6UB98 2062 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 ARPC4-TTLL3A0A0A6YYG9 625 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 IGHV5-10-1A0A0J9YXX1 117 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 CTAGE5O15320 804 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 SSX5O60225 188 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 UGT1A9O60656 530 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 BAG2O95816 211 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 GKN3PP0CG01 181 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 PITPNAQ00169 270 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 AP1B1Q10567 949 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 ASPHQ12797 758 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 MICBQ29980 383 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 COA6Q5JTJ3 125 aaKnown RBP1.4□□□□□ -2.19
SMC4-219ENST00000487747 SAMD4BQ5PRF9 694 aaKnown RBP1.4□□□□□ -2.19
SMC4-219ENST00000487747 ZNF546Q86UE3 836 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 KDM8Q8N371 416 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 OR10A7Q8NGE5 316 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 MRPL38Q96DV4 380 aaKnown RBP1.4□□□□□ -2.19
SMC4-219ENST00000487747 ECSITQ9BQ95 431 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 LHX5Q9H2C1 402 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 POPDC2Q9HBU9 364 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 GLRX2Q9NS18 164 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 XCL2Q9UBD3 114 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 KNSTRNQ9Y448 316 aa1.4□□□□□ -2.19
SMC4-219ENST00000487747 LOC110117498-PIK3R3F6TDL0 507 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 VPS26AO75436 327 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 TGFAP01135 160 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 CSF3P09919 207 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 H2BFMP0C1H6 154 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 CCDC192P0DO97 292 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 IGHV1-8P0DP01 117 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 ETS1P14921 441 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 CMA1P23946 247 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 SOX6P35712 828 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 GYG1P46976 350 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 PSMD8P48556 350 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 GSSP48637 474 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 AP3M2P53677 418 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 LOXL1Q08397 574 aaPredicted RBP1.39□□□□□ -2.19
SMC4-219ENST00000487747 PDK1Q15118 436 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 BHLHA15Q7RTS1 189 aaPredicted RBP1.39□□□□□ -2.19
SMC4-219ENST00000487747 DHRSXQ8N5I4 330 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 MRPL43Q8N983 215 aaKnown RBP1.39□□□□□ -2.19
SMC4-219ENST00000487747 OR10G4Q8NGN3 311 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 PELI1Q96FA3 418 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 SAMD8Q96LT4 415 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 DOK1Q99704 481 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 TIMM29Q9BSF4 260 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 SPXQ9BT56 116 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 VAT1LQ9HCJ6 419 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.39□□□□□ -2.193e-18■■■■■ 78.4
SMC4-219ENST00000487747 KCNIP1Q9NZI2 227 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 GNG12Q9UBI6 72 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 SIGLEC9Q9Y336 463 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 PTPRTO14522 1441 aa1.39□□□□□ -2.19
SMC4-219ENST00000487747 TMEM223A0PJW6 202 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 H3BNH8 94 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 LGALS9O00182 355 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 XKRYO14609 159 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 RAD51BO15315 384 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 PLA2G16P53816 162 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 PKNOX1P55347 436 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 SLC7A9P82251 487 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 HSF2Q03933 536 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 ZNF616Q08AN1 781 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 IL15RAQ13261 267 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 SLC25A52Q3SY17 297 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 FAM71F2Q6NXP2 309 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 MISPQ8IVT2 679 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 TVP23CQ96ET8 276 aa1.38□□□□□ -2.19
SMC4-219ENST00000487747 A0A1B0GW55 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 A0A1W2PNN7 141 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 ZNF878C9JN71 531 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 CLDN5O00501 218 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 LANCL1O43813 399 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 MT-ND3P03897 115 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 IL4P05112 153 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 UBTFL1P0CB47 393 aaPredicted RBP1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4L2P0CJ85 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4L3P0CJ86 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4L5P0CJ88 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4L6P0CJ89 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DUX4L7P0CJ90 424 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 DNAJB1P25685 340 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 TGFBR1P36897 503 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 SLC11A1P49279 550 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 CEBPEQ15744 281 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 ZBED5Q49AG3 693 aa1.37□□□□□ -2.19
SMC4-219ENST00000487747 HES5Q5TA89 166 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms