RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PAX7P23759 505 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 GADD45AP24522 165 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 FKBP2P26885 142 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 DPP4P27487 766 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 DNASE1L1P49184 302 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 DIO1P49895 249 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 RPS7P62081 194 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 POU4F2Q12837 409 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 MYBPHQ13203 477 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 CAMK2BQ13554 666 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 OR7A5Q15622 319 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 TSTQ16762 297 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.5□□□□□ -1.057e-11■■□□□ 12.1
SF3B1-211ENST00000487698 SLC35D3Q5M8T2 416 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 LINC01590Q5TEZ4 76 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 LEG1Q6P5S2 330 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 LHFPL3Q86UP9 236 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 JAZF1Q86VZ6 243 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ACBD7Q8N6N7 88 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ARIH2OSQ8N7S6 290 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 OR5M1Q8NGP8 315 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 OR52N1Q8NH53 320 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ZNRF4Q8WWF5 429 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 TM9SF4Q92544 642 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 RPL3LQ92901 407 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 FER1L6-AS2Q96M78 137 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 GNRHR2Q96P88 292 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 UBL7Q96S82 380 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 TIMP4Q99727 224 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ARHGAP9Q9BRR9 750 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 TXNIPQ9H3M7 391 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ISYNA1Q9NPH2 558 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 FANCFQ9NPI8 374 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 INPP5EQ9NRR6 644 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 DEPPQ9NTK1 212 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ASB6Q9NWX5 421 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 CHCHD3Q9NX63 227 aaKnown RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 ALKBH4Q9NXW9 302 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 STMN3Q9NZ72 180 aa8.5□□□□□ -1.05
SF3B1-211ENST00000487698 SPIN1Q9Y657 262 aaPredicted RBP8.5□□□□□ -1.05
SF3B1-211ENST00000487698 NPIPB13A6NJU9 1138 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 C12orf71A8MTZ7 269 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 NPIPB4C9JG80 1138 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 C11orf98E9PRG8 122 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 MS4A18H0YCH9 400 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 RNF13O43567 381 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 CBR3O75828 277 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 NEURL1O76050 574 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 TFPIP10646 304 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF17P17021 662 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ITGA3P26006 1051 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 SHC1P29353 583 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ATP6V1E1P36543 226 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 CLK1P49759 484 aaKnown RBP8.49□□□□□ -1.05
SF3B1-211ENST00000487698 SLC16A1P53985 500 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
SF3B1-211ENST00000487698 RPL27P61353 136 aaKnown RBP8.49□□□□□ -1.05
SF3B1-211ENST00000487698 PUDPQ08623 228 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 C19orf57Q0VDD7 668 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ACKR1Q16570 336 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 MS4A18Q3C1V0 323 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 LCN1P1Q5VSP4 162 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ABHD17BQ5VST6 288 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 H1FNTQ75WM6 255 aaPredicted RBP8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ADCK1Q86TW2 530 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 POMGNT2Q8NAT1 580 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ADPRHL1Q8NDY3 354 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ATP6V1C2Q8NEY4 427 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 SNX18Q96RF0 628 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 DCUN1D5Q9BTE7 237 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 CHST11Q9NPF2 352 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 NDUFB11Q9NX14 153 aa8.49□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF346Q9UL40 294 aaKnown RBP8.49□□□□□ -1.05
SF3B1-211ENST00000487698 A0A1W2PNV4 684 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 AIREO43918 545 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 SERPINI2O75830 405 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TFP02787 698 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 MRPL3P09001 348 aaKnown RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 CPEP16870 476 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF182P17025 639 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TCEA1P23193 301 aaKnown RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 CD96P40200 585 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 P2RY4P51582 365 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 SOX8P57073 446 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 NCS1P62166 190 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 LGALS3BPQ08380 585 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ACSM1Q08AH1 577 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 RTP5Q14D33 572 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 PON3Q15166 354 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF239Q16600 458 aaKnown RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GLYR1Q49A26 553 aaPredicted RBP8.48□□□□□ -1.05
SF3B1-211ENST00000487698 TUBA3EQ6PEY2 450 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 VASH2Q86V25 355 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 GHDCQ8N2G8 530 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 KLHL36Q8N4N3 616 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 CLEC1AQ8NC01 280 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 SMPDL3BQ92485 455 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 RELTQ969Z4 430 aa8.48□□□□□ -1.05
SF3B1-211ENST00000487698 NXPE2Q96DL1 559 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms