RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 FAIMQ9NVQ4 179 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 MRPL39Q9NYK5 338 aaKnown RBP16.05■□□□□ 0.16
CLDN11-206ENST00000486429 CISD1Q9NZ45 108 aaKnown RBP16.05■□□□□ 0.16
CLDN11-206ENST00000486429 POU2F3Q9UKI9 436 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 SLC7A7Q9UM01 511 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 USP22Q9UPT9 525 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 SH3GLB1Q9Y371 365 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 C2CD3Q4AC94 2353 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 LOC102725191A0A1B0GVB3 256 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 ZNF432O94892 652 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 MT-ATP6P00846 226 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 IFNA14P01570 189 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 SOD3P08294 240 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 DANCRP0C864 163 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 ROR2Q01974 943 aaKnown RBP16.04■□□□□ 0.16
CLDN11-206ENST00000486429 POU3F1Q03052 451 aaPredicted RBP16.04■□□□□ 0.16
CLDN11-206ENST00000486429 LTBQ06643 244 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 PUDPQ08623 228 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 SPOCK1Q08629 439 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 PMS2P3Q13401 168 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 TBRG1Q3YBR2 411 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 LRRC23Q53EV4 343 aaPredicted RBP16.04■□□□□ 0.16
CLDN11-206ENST00000486429 TTC33Q6PID6 262 aaPredicted RBP16.04■□□□□ 0.16
CLDN11-206ENST00000486429 LINC00114Q6XXX2 140 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 WDR88Q6ZMY6 472 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 LINGO2Q7L985 606 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 SPATA21Q7Z572 469 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 CARM1Q86X55 608 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 PIK3C3Q8NEB9 887 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 GTPBP3Q969Y2 492 aaKnown RBP16.04■□□□□ 0.16
CLDN11-206ENST00000486429 BOD1Q96IK1 185 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 MPP4Q96JB8 637 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 Q96MF0 132 aa16.04■□□□□ 0.16
CLDN11-206ENST00000486429 SETD2Q9BYW2 2564 aaPredicted RBP16.04■□□□□ 0.16
CLDN11-206ENST00000486429 LRRN3E7EW58 273 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 LYPD3O95274 346 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 HPRP00739 348 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 THY1P04216 161 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 COX4I1P13073 169 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 ATP5J2P56134 94 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 UBE2NP61088 152 aaKnown RBP16.03■□□□□ 0.16
CLDN11-206ENST00000486429 PGGHGQ32M88 737 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 TSPYL5Q86VY4 417 aaPredicted RBP16.03■□□□□ 0.16
CLDN11-206ENST00000486429 MICU2Q8IYU8 434 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 DEPDC4Q8N2C3 294 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 GPR137CQ8N3F9 429 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 C18orf12Q96KH6 178 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 OR2M2Q96R28 347 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 ALG2Q9H553 416 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 AP3M1Q9Y2T2 418 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 NOX1Q9Y5S8 564 aa16.03■□□□□ 0.16
CLDN11-206ENST00000486429 NF1P21359 2839 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 ELOVL7A1L3X0 281 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 KPNA4O00629 521 aaPredicted RBP16.02■□□□□ 0.16
CLDN11-206ENST00000486429 TNFRSF1BP20333 461 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 TAS2R41P59536 307 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 ZNF74Q16587 644 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 CYBRD1Q53TN4 286 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 ANKRD16Q6P6B7 361 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 DEF8Q6ZN54 512 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 TMEM123Q8N131 208 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 ANKK1Q8NFD2 765 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 OR5J2Q8NH18 312 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 SLC19A3Q9BZV2 496 aa16.02■□□□□ 0.16
CLDN11-206ENST00000486429 NSRP1Q9H0G5 558 aaKnown RBP16.02■□□□□ 0.16
CLDN11-206ENST00000486429 USF3Q68DE3 2245 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 MS4A18H0YCH9 400 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 RPL36A-HNRNPH2H7BZ11 118 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 OVOL3O00110 214 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 SERPINI2O75830 405 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 OR6A2O95222 327 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 HLA-DOBP13765 273 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 AHCYP23526 432 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 KDELR2P33947 212 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 CDKN1AP38936 164 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 MS4A18Q3C1V0 323 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 CARD17Q5XLA6 110 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 DTX2Q86UW9 622 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 MAGEE2Q8TD90 523 aaPredicted RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 BCL2L2Q92843 193 aaPredicted RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 TRMT61AQ96FX7 289 aaKnown RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 ELAC2Q9BQ52 826 aaKnown RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 ZNF426Q9BUY5 554 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 TRAF4Q9BUZ4 470 aaPredicted RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 POLR2J2Q9GZM3 115 aaKnown RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 POLR2J3Q9H1A7 115 aaKnown RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 FKRPQ9H9S5 495 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 CRLF2Q9HC73 371 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 GPR35Q9HC97 309 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 MED29Q9NX70 200 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 CMTM6Q9NX76 183 aa16.01■□□□□ 0.15
CLDN11-206ENST00000486429 ZNF469Q96JG9 3925 aaPredicted RBP16.01■□□□□ 0.15
CLDN11-206ENST00000486429 A0A096LPE4 126 aa16■□□□□ 0.15
CLDN11-206ENST00000486429 ARPC4-TTLL3A0A0A6YYG9 625 aa16■□□□□ 0.15
CLDN11-206ENST00000486429 A0A1W2PPZ6 126 aa16■□□□□ 0.15
CLDN11-206ENST00000486429 E7EQL1 145 aa16■□□□□ 0.15
CLDN11-206ENST00000486429 PLPP3O14495 311 aa16■□□□□ 0.15
CLDN11-206ENST00000486429 OR5F1O95221 314 aa16■□□□□ 0.15
CLDN11-206ENST00000486429 CH25HO95992 272 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms