RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 TMCC3Q9ULS5 477 aa13.74□□□□□ -0.21
RPUSD3-217ENST00000485705 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
RPUSD3-217ENST00000485705 NOSIPQ9Y314 301 aaKnown RBP13.74□□□□□ -0.21
RPUSD3-217ENST00000485705 TRAV27A0A087WT01 109 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 A1L4Q6 167 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 BLOC1S5-TXNDC5H3BN57 136 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 OR10H3O60404 316 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 SERPINI2O75830 405 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 VAMP5O95183 116 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 CLDN1O95832 211 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 SAGP10523 405 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 HOXB6P17509 224 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 AHCYP23526 432 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 AQP2P41181 271 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 RPL18Q07020 188 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 POU4F3Q15319 338 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 EEF1A1P5Q5VTE0 462 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 ZNF474Q6S9Z5 364 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 WDFY1Q8IWB7 410 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 OR51A7Q8NH64 312 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 TNFRSF13CQ96RJ3 184 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 PIGMQ9H3S5 423 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 YY1AP1Q9H869 796 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 NTN4Q9HB63 628 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 PLSCR4Q9NRQ2 329 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 ARMC1Q9NVT9 282 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 DNAJB9Q9UBS3 223 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 PRSS50Q9UI38 385 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 UTP20O75691 2785 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-217ENST00000485705 LOC102725191A0A1B0GVB3 256 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 HTR3EA5X5Y0 456 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 A8MXE2 369 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 GNGT2O14610 69 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 GPR171O14626 319 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 MSTNO14793 375 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 KLF4O43474 513 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 TRAF3IP2O43734 574 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 OR6A2O95222 327 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 IGHV3-9P01782 118 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 TSPAN19P0C672 248 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 CD8BP10966 210 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 ZNF26P17031 533 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 ZNF43P17038 809 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 GRNP28799 593 aaKnown RBP13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 UQCRC1P31930 480 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 CLDN17P56750 224 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 POU3F1Q03052 451 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 TFF3Q07654 80 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 ZP4Q12836 540 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 C1DQ13901 141 aaKnown RBP13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 ZNF770Q6IQ21 691 aaPredicted RBP13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 PGBD2Q6P3X8 592 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 CASP12Q6UXS9 341 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 TFAP2EQ6VUC0 442 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 OAFQ86UD1 273 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 UEVLDQ8IX04 471 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 CDK20Q8IZL9 346 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 HS3ST5Q8IZT8 346 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 TXNDC15Q96J42 360 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 TMEM5Q9Y2B1 443 aa13.72□□□□□ -0.21
RPUSD3-217ENST00000485705 H3BNX3 289 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 C19orf84I3L1E1 186 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 CLOCKO15516 846 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 RNF13O43567 381 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 RRP9O43818 475 aaKnown RBP13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 ENTPD5O75356 428 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 MRPL33O75394 65 aaKnown RBP13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 CCNB2O95067 398 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 F13BP05160 661 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 OR3A2P47893 321 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 SELENOPP49908 381 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 ASCL1P50553 236 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 RPS4XP62701 263 aaKnown RBP13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 MICAQ29983 383 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 HMBOX1Q6NT76 420 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 C1orf94Q6P1W5 598 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 AAED1Q7RTV5 226 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 PXKQ7Z7A4 578 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 AMIGO2Q86SJ2 522 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 LRTOMTQ8WZ04 291 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 TMEM45BQ96B21 275 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 EMC6Q9BV81 110 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 ENKD1Q9H0I2 346 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 MCCC2Q9HCC0 563 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 FANCFQ9NPI8 374 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 NPDC1Q9NQX5 325 aaPredicted RBP13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 MED29Q9NX70 200 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 HIF3AQ9Y2N7 669 aa13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.21
RPUSD3-217ENST00000485705 PTP4A3O75365 173 aa13.7□□□□□ -0.22
RPUSD3-217ENST00000485705 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
RPUSD3-217ENST00000485705 E2F6O75461 281 aa13.7□□□□□ -0.22
RPUSD3-217ENST00000485705 GASTP01350 101 aa13.7□□□□□ -0.22
RPUSD3-217ENST00000485705 POU2F1P14859 743 aa13.7□□□□□ -0.22
RPUSD3-217ENST00000485705 IFNGR1P15260 489 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms