RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	TMCO1	Q9UM00	188 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	POLDIP2	Q9Y2S7	368 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TIMM10B	Q9Y5J6	103 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	STYXL1	Q9Y6J8	313 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	TRIO	O75962	3097 aa		3.02	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF831	Q5JPB2	1677 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SMIM28	A0A1B0GU29	152 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024		E9PBE3	544 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SULT2B1	O00204	365 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	PI15	O43692	258 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	PRKAB2	O43741	272 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	EFNA2	O43921	213 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	PRKY	O43930	277 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	OR10H3	O60404	316 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SERPINA3	P01011	423 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	AGT	P01019	485 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	IGHG4	P01861	327 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	STS	P08842	583 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	TOP1	P11387	765 aa	Known RBP	3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	COX5A	P20674	150 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	CCNC	P24863	283 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	GCA	P28676	217 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	GNA11	P29992	359 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	MAP3K8	P41279	467 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	GYG1	P46976	350 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	RPL29	P47914	159 aa	Known RBP	3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	DAP3	P51398	398 aa	Known RBP	3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	PRKX	P51817	358 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC25A1	P53007	311 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	ST3GAL3	Q11203	375 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	PLD1	Q13393	1074 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	C1orf61	Q13536	156 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	DPYSL3	Q14195	570 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	TGIF1	Q15583	401 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	QRICH1	Q2TAL8	776 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	TRIM16L	Q309B1	348 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	TP53I3	Q53FA7	332 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	C6orf226	Q5I0X4	101 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	FAM120AOS	Q5T036	256 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC22A10	Q63ZE4	541 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	WSCD1	Q658N2	575 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	TPGS2	Q68CL5	300 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	H2BFWT	Q7Z2G1	175 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	CCDC65	Q8IXS2	484 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	BBS5	Q8N3I7	341 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SVOPL	Q8N434	492 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	OR9K2	Q8NGE7	335 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	OR51G2	Q8NGK0	314 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	OR52K2	Q8NGK3	314 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	OR8J1	Q8NGP2	316 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	CCDC26	Q8TAB7	109 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SCFD1	Q8WVM8	642 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	CXorf40B	Q96DE9	158 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SEC22A	Q96IW7	307 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	TCEANC2	Q96MN5	208 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	RHBG	Q9H310	441 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	RAB18	Q9NP72	206 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC2A8	Q9NY64	477 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SPATA7	Q9P0W8	599 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	ARMCX1	Q9P291	453 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	SPRR3	Q9UBC9	169 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	WARS2	Q9UGM6	360 aa	Known RBP	3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	DCDC2	Q9UHG0	476 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	IKZF2	Q9UKS7	526 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	PLLP	Q9Y342	182 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	IFT52	Q9Y366	437 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	NBEAL1	Q6ZS30	2694 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	MYOM3	Q5VTT5	1437 aa		3.01	□□□□□ -1.93
VPS8-223	ENST00000485024	ARFGEF2	Q9Y6D5	1785 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	CACNA1F	O60840	1977 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	CCT8L1P	A6NM43	557 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	TRDC	B7Z8K6	153 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	FCN1	O00602	326 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	NBR2	O15453	112 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF264	O43296	627 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	NOL4	O94818	638 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	DUSP14	O95147	198 aa	Known RBP	3	□□□□□ -1.93
VPS8-223	ENST00000485024	GNA14	O95837	355 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	LGALS2	P05162	132 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	RET	P07949	1114 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	MCF2	P10911	925 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	IDS	P22304	550 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	PTBP1	P26599	531 aa	Known RBP eCLIP	3	□□□□□ -1.93
VPS8-223	ENST00000485024	ADORA2B	P29275	332 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	IL12A	P29459	219 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	NTS	P30990	170 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	CCR1	P32246	355 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	HMGCL	P35914	325 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	KIR2DS2	P43631	304 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	SEC61G	P60059	68 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	PAX2	Q02962	417 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	ASAH1	Q13510	395 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	ARL6IP1	Q15041	203 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	TIGIT	Q495A1	244 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	PAGE2B	Q5JRK9	111 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	ATL3	Q6DD88	541 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	REG3G	Q6UW15	175 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC22A9	Q8IVM8	553 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	NRM	Q8IXM6	262 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms