RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OR2G3Q8NGZ4 309 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 CD300LFQ8TDQ1 290 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 ACOT11Q8WXI4 607 aaPredicted RBP1.59□□□□□ -2.15
SCAF11-207ENST00000484275 NEURL3Q96EH8 262 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 RIT2Q99578 217 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 RIOK2Q9BVS4 552 aaKnown RBP1.59□□□□□ -2.15
SCAF11-207ENST00000484275 RBKSQ9H477 322 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 MOSPD1Q9UJG1 213 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 KNSTRNQ9Y448 316 aa1.59□□□□□ -2.15
SCAF11-207ENST00000484275 IGHV5-51A0A0C4DH38 117 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 RNF103-CHMP3A0A140T963 221 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 A0A1W2PP18 115 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 LOC110117498-PIK3R3F6TDL0 507 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 TAPBPO15533 448 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 PFKFB2O60825 505 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 ALDOBP05062 364 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 IGHV3-43DP0DP04 118 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 MMP11P24347 488 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 SYCNQ0VAF6 134 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 SPIN3Q5JUX0 258 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 ZNF684Q5T5D7 378 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 CES3Q6UWW8 571 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 LINC00173Q6ZV60 143 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 PGAP1Q75T13 922 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 CLEC4FQ8N1N0 589 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 PDXPQ96GD0 296 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 ZNF355PQ9NSJ1 428 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 CHMP2BQ9UQN3 213 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 PIN4Q9Y237 131 aaKnown RBP1.58□□□□□ -2.16
SCAF11-207ENST00000484275 RPL36Q9Y3U8 105 aaKnown RBP1.58□□□□□ -2.16
SCAF11-207ENST00000484275 PCNX2A6NKB5 2137 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 ZNF407Q9C0G0 2248 aa1.58□□□□□ -2.16
SCAF11-207ENST00000484275 A0A1W2PNV4 684 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 LRP5LA4QPB2 252 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 A8MUU9 505 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 NPIPA7E9PJI5 369 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 F8WDY8 70 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 RRP8O43159 456 aaKnown RBP1.57□□□□□ -2.16
SCAF11-207ENST00000484275 SCGB2A1O75556 95 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 BGLAPP02818 100 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 LINC00869P0C866 280 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 NPIPA8P0DM63 369 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 PRPS2P11908 318 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 HPGDP15428 266 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 OMGP23515 440 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 DDOSTP39656 456 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 NCBP2P52298 156 aaKnown RBP eCLIP1.57□□□□□ -2.16
SCAF11-207ENST00000484275 MOB3BQ86TA1 216 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 RIMKLAQ8IXN7 391 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 SLC38A6Q8IZM9 456 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 AURKBQ96GD4 344 aaPredicted RBP1.57□□□□□ -2.16
SCAF11-207ENST00000484275 AMDHD1Q96NU7 426 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 WFIKKN1Q96NZ8 548 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 CHAC1Q9BUX1 264 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 CTPS2Q9NRF8 586 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 THUMPD1Q9NXG2 353 aaKnown RBP1.57□□□□□ -2.16
SCAF11-207ENST00000484275 KCNIP1Q9NZI2 227 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 NPIPA1Q9UND3 350 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 MRPS33Q9Y291 106 aaKnown RBP1.57□□□□□ -2.16
SCAF11-207ENST00000484275 SHROOM3Q8TF72 1996 aa1.57□□□□□ -2.16
SCAF11-207ENST00000484275 IGLV3-12A0A075B6K2 115 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 IGHV3-66A0A0C4DH42 116 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 INS-IGF2F8WCM5 200 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 CSF3P09919 207 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 GKN3PP0CG01 181 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 PSMC3P17980 439 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 TCN2P20062 427 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 SOX6P35712 828 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 MAP3K8P41279 467 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 TDO2P48775 406 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 PDZK1IP1Q13113 114 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 NCR3LG1Q68D85 454 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 AFTPHQ6ULP2 937 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 TRIM69Q86WT6 500 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 HDDC3Q8N4P3 179 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 OR1N2Q8NGR9 330 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 OSTF1Q92882 214 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 FGF14Q92915 247 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 PELI1Q96FA3 418 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 OXGR1Q96P68 337 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 SECISBP2Q96T21 854 aaKnown RBP1.56□□□□□ -2.16
SCAF11-207ENST00000484275 KCNK16Q96T55 309 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 RNF2Q99496 336 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 RPP21Q9H633 154 aaKnown RBP1.56□□□□□ -2.16
SCAF11-207ENST00000484275 C12orf10Q9HB07 376 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 IL26Q9NPH9 171 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 SPATA7Q9P0W8 599 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 XCL2Q9UBD3 114 aa1.56□□□□□ -2.16
SCAF11-207ENST00000484275 RGS16O15492 202 aaPredicted RBP1.55□□□□□ -2.16
SCAF11-207ENST00000484275 RBFOX2O43251 390 aaKnown RBP eCLIP1.55□□□□□ -2.16
SCAF11-207ENST00000484275 SEC22BO75396 215 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 ZDHHC11BP0C7U3 371 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 TNNI3P19429 210 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 CMA1P23946 247 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 GCAP28676 217 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 C1orf61Q13536 156 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 VGLL4Q14135 290 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 TAF9Q16594 264 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 TTLL9Q3SXZ7 439 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms