RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 NAA10P41227 235 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 POLR2HP52434 150 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR12D2P58182 307 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 IFITM3Q01628 133 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 MXD1Q05195 221 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 C17orf67Q0P5P2 114 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 GALEQ14376 348 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 DCAF12Q5T6F0 453 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 LINC01590Q5TEZ4 76 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 RAB11FIP2Q7L804 512 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 GRINAQ7Z429 371 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 SLC43A2Q8N370 569 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 KDM8Q8N371 416 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 KLHL36Q8N4N3 616 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 ARIH2OSQ8N7S6 290 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 KBTBD8Q8NFY9 601 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 NLGN4YQ8NFZ3 816 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR52N1Q8NH53 320 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMCO6Q96DC7 493 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 TSPAN32Q96QS1 320 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMED9Q9BVK6 235 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 HDHD5Q9BXW7 423 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 C6orf62Q9GZU0 229 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 NXF2Q9GZY0 626 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 PISDQ9UG56 409 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 FBXL2Q9UKC9 423 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 TRAV36DV7A0A075B6V5 113 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 C9orf172C9J069 976 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 C9J4A7 227 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CLDN25C9JDP6 229 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 C11orf98E9PRG8 122 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF670-ZNF695F2Z2N8 137 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CTDSP2O14595 271 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 SELENOFO60613 162 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CLEC2LP0C7M8 214 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 NAGAP17050 411 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 PYCR1P32322 319 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 C19orf57Q0VDD7 668 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 ISXQ2M1V0 245 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CRTC2Q53ET0 693 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 MESTQ5EB52 335 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 SLC6A19Q695T7 634 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 LEG1Q6P5S2 330 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CD200R1LQ6Q8B3 271 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 DHRS13Q6UX07 377 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF511Q8NB15 262 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 TTC9Q92623 222 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 UFD1Q92890 307 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 BORCS5Q969J3 196 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 SPACA9Q96E40 222 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CDC6Q99741 560 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF700Q9H0M5 742 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 FKRPQ9H9S5 495 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPRD1BQ9NQG5 326 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 BABAM2Q9NXR7 383 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 KLRF1Q9NZS2 232 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF229Q9UJW7 825 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 COPS3Q9UNS2 423 aa7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CAB39Q9Y376 341 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 CHCHD2Q9Y6H1 151 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-204ENST00000483763 EML6Q6ZMW3 1958 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 IGF2RP11717 2491 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ANKUB1A6NFN9 424 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 A8MVM7 634 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PRR32B1ATL7 298 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PLGP00747 810 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SDHAP31040 664 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 GABRA5P31644 462 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SDC2P34741 201 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CASP3P42574 277 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 DIO1P49895 249 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 E2F1Q01094 437 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ACSM1Q08AH1 577 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 NTRK2Q16620 822 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 FAM69AQ5T7M9 428 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PRAMEF20Q5VT98 475 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 C1orf140Q5VVS0 124 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 OTPQ5XKR4 325 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMEM91Q6ZNR0 172 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 GDPGP1Q6ZNW5 385 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 NUP54Q7Z3B4 507 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CROCCP3Q8IVE0 287 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR6V1Q8N148 313 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 EXD3Q8N9H8 876 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 WDSUB1Q8N9V3 476 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR5M1Q8NGP8 315 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR6K6Q8NGW6 343 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR5J2Q8NH18 312 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SUN5Q8TC36 379 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ABTB1Q969K4 478 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 C4orf36Q96KX1 117 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 KCNS3Q9BQ31 491 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SPRY4Q9C004 299 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 STRADBQ9C0K7 418 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PPIL3Q9H2H8 161 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 MMP27Q9H306 513 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF160Q9HCG1 818 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ISYNA1Q9NPH2 558 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SNTG1Q9NSN8 517 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 FOXJ2Q9P0K8 574 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms