RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CLDN17P56750 224 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 TGFBR3Q03167 851 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 ST3GAL3Q11203 375 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 ZP4Q12836 540 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 PMS2P3Q13401 168 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 C1DQ13901 141 aaKnown RBP15.83■□□□□ 0.12
HDAC6-225ENST00000483506 PPA1Q15181 289 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 GLYATQ6IB77 296 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 NIPAL3Q6P499 406 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 UEVLDQ8IX04 471 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 TMEM123Q8N131 208 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 C10orf53Q8N6V4 93 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 TMEM255BQ8WV15 326 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 TMEM239Q8WW34 195 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 LIPHQ8WWY8 451 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 NGBQ9NPG2 151 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 NANSQ9NR45 359 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 MAN2C1Q9NTJ4 1040 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 DCAF13Q9NV06 445 aaKnown RBP15.83■□□□□ 0.12
HDAC6-225ENST00000483506 EGFL7Q9UHF1 273 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 SNX13Q9Y5W8 968 aa15.83■□□□□ 0.12
HDAC6-225ENST00000483506 ALPK2Q86TB3 2170 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 HTR3EA5X5Y0 456 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 RPL36A-HNRNPH2H7BZ11 118 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 FFAR1O14842 300 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 AKAP8O43823 692 aaKnown RBP15.82■□□□□ 0.12
HDAC6-225ENST00000483506 PRSS23O95084 383 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 CH25HO95992 272 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 HLA-DOBP13765 273 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 IFNA8P32881 189 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 TESK1Q15569 626 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 DEFB107AQ8IZN7 70 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 RNF148Q8N7C7 305 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 MBD6Q96DN6 1003 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 MUCL1Q96DR8 90 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 PLPPR2Q96GM1 343 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 NSL1Q96IY1 281 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 OR2M2Q96R28 347 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 CDRT15Q96T59 188 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 MAGEL2Q9UJ55 1249 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 SAMD4AQ9UPU9 718 aaKnown RBP15.82■□□□□ 0.12
HDAC6-225ENST00000483506 SLC25A15Q9Y619 301 aa15.82■□□□□ 0.12
HDAC6-225ENST00000483506 CIB4A0PJX0 185 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 ENO4A6NNW6 628 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 ZNF587BE7ETH6 402 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 KPNA4O00629 521 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-225ENST00000483506 UPK3AO75631 287 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 ATE1O95260 518 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 RAF1P04049 648 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 TSPAN19P0C672 248 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 CALB2P22676 271 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 POU3F1Q03052 451 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-225ENST00000483506 STK11Q15831 433 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 NCMAPQ5T1S8 102 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 FKBP9P1Q75LS8 142 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 LINGO2Q7L985 606 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 TSEN54Q7Z6J9 526 aaKnown RBP15.81■□□□□ 0.12
HDAC6-225ENST00000483506 FAM156AQ8NDB6 213 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 PFN4Q8NHR9 129 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 ALKBH3Q96Q83 286 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-225ENST00000483506 TAS2R5Q9NYW4 299 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 MED31Q9Y3C7 131 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 ENPP4Q9Y6X5 453 aa15.81■□□□□ 0.12
HDAC6-225ENST00000483506 CADP27708 2225 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 SLC43A1O75387 559 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 GMNNO75496 209 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 OR7A10O76100 309 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 ADORA3P0DMS8 318 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 T-ENOLP0DO92 83 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 IST1P53990 364 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 SH3BGRP55822 239 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-225ENST00000483506 LGALS3BPQ08380 585 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 ZNF704Q6ZNC4 412 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-225ENST00000483506 ARHGAP24Q8N264 748 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 LRRC17Q8N6Y2 441 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 WDR31Q8NA23 367 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 RBM15BQ8NDT2 890 aaKnown RBP15.8■□□□□ 0.12
HDAC6-225ENST00000483506 PIK3C3Q8NEB9 887 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 SGTBQ96EQ0 304 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 LRR1Q96L50 414 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 ANKRD19PQ9H560 264 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 ESRP2Q9H6T0 727 aaKnown RBP15.8■□□□□ 0.12
HDAC6-225ENST00000483506 SLC17A5Q9NRA2 495 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 C20orf141Q9NUB4 165 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 NPAP1Q9NZP6 1156 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 PLEKHA6Q9Y2H5 1048 aa15.8■□□□□ 0.12
HDAC6-225ENST00000483506 CELSR1Q9NYQ6 3014 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 B2RBV5 119 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 J3KTA2 159 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 KRT33AO76009 404 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 SEMG1P04279 462 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 FUT4P22083 530 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 DNASE1P24855 282 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 MXRA7P84157 204 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 IL1RL1Q01638 556 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 TRAM2Q15035 370 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 C9orf135Q5VTT2 229 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 ADAM5Q6NVV9 412 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 C20orf196Q8IYI0 205 aa15.79■□□□□ 0.12
HDAC6-225ENST00000483506 OR1K1Q8NGR3 316 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms