RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 MAIP1Q8WWC4 291 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 ACOT11Q8WXI4 607 aaPredicted RBP1.31□□□□□ -2.2
KDM1A-204ENST00000481879 LRRC58Q96CX6 371 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 DNAJC19Q96DA6 116 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 BMFQ96LC9 184 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 TSNARE1Q96NA8 513 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 OXGR1Q96P68 337 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 CLCC1Q96S66 551 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 RSPO3Q9BXY4 272 aaPredicted RBP1.31□□□□□ -2.2
KDM1A-204ENST00000481879 SMOXQ9NWM0 555 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 TMOD2Q9NZR1 351 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 PCYOX1Q9UHG3 505 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 TMCO1Q9UM00 188 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 ZNF835Q9Y2P0 537 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 KCNIP3Q9Y2W7 256 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 AP1M2Q9Y6Q5 423 aa1.31□□□□□ -2.2
KDM1A-204ENST00000481879 IGLV3-22A0A075B6J6 115 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CIB4A0PJX0 185 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 K7EQM0 130 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 ARPC3O15145 178 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 POLR2DO15514 142 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 PRKAB2O43741 272 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 TBX19O60806 448 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 HEXBP07686 556 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 MRPL3P09001 348 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CSF3P09919 207 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 GKN3PP0CG01 181 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 HSPA5P11021 654 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CCDC130P13994 396 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 IGFBP3P17936 291 aaPredicted RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CMA1P23946 247 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 IL12AP29459 219 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 DDOSTP39656 456 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 RPL13AP40429 203 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 SPIBQ01892 262 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 SMARCB1Q12824 385 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 FZD2Q14332 565 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CCDC92Q53HC0 331 aaPredicted RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 TMEM255AQ5JRV8 349 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 LY6G6FQ5SQ64 297 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 TMEM225Q6GV28 225 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 LYPD2Q6UXB3 125 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CCDC50Q8IVM0 306 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 TTC5Q8N0Z6 440 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 FAM86B1Q8N7N1 296 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 ZNF709Q8N972 641 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 MFSD9Q8NBP5 474 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 ACTRT1Q8TDG2 376 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 THRSPQ92748 146 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 FRZBQ92765 325 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 FGF14Q92915 247 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 TM4SF19Q96DZ7 209 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 SENP8Q96LD8 212 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 C16orf45Q96MC5 204 aaPredicted RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 TTC25Q96NG3 672 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 SLC38A2Q96QD8 506 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 MTMR9Q96QG7 549 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 ZNF607Q96SK3 696 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 RIOK2Q9BVS4 552 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CAPS2Q9BXY5 557 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 RAB34Q9BZG1 259 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 ZNF430Q9H8G1 570 aaPredicted RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 NHEJ1Q9H9Q4 299 aaPredicted RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 GIN1Q9NXP7 522 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 CALYQ9NYX4 217 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 SPATA7Q9P0W8 599 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 OPN4Q9UHM6 478 aa1.3□□□□□ -2.2
KDM1A-204ENST00000481879 YTHDF2Q9Y5A9 579 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 F11RQ9Y624 299 aaKnown RBP1.3□□□□□ -2.2
KDM1A-204ENST00000481879 KIF26AQ9ULI4 1882 aaPredicted RBP1.29□□□□□ -2.2
KDM1A-204ENST00000481879 IGLV11-55A0A075B6I3 123 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PPIAL4EA0A075B759 164 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PLAC8L1A1L4L8 177 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 COLCA2A8K830 154 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PEX7O00628 323 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PEX11AO75192 247 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 IDH1O75874 414 aaKnown RBP1.29□□□□□ -2.2
KDM1A-204ENST00000481879 CTDNEP1O95476 244 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 TLX1NBP0CAT3 122 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PPIAL4FP0DN26 164 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 IGHV3-43DP0DP04 118 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 NCK1P16333 377 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PSMA5P28066 241 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 GNA11P29992 359 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 SOX6P35712 828 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 ATP1B3P54709 279 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 CDK16Q00536 496 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 OR5I1Q13606 314 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 MESDQ14696 234 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 ZBED5Q49AG3 693 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PDZK1Q5T2W1 519 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 ZSCAN25Q6NSZ9 544 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 SLC25A24Q6NUK1 477 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 UQCC3Q6UW78 93 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 NCCRP1Q6ZVX7 275 aaPredicted RBP1.29□□□□□ -2.2
KDM1A-204ENST00000481879 ECHDC2Q86YB7 292 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PCP2Q8IVA1 136 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 PIANPQ8IYJ0 282 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 ZADH2Q8N4Q0 377 aa1.29□□□□□ -2.2
KDM1A-204ENST00000481879 ZNF615Q8N8J6 731 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms