RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 C1GALT1C1LP0DN25 315 aa8.35□□□□□ -1.07
TTC3-216ENST00000479930 PPP1CAP62136 330 aa8.35□□□□□ -1.07
TTC3-216ENST00000479930 TNK1Q13470 666 aa8.35□□□□□ -1.07
TTC3-216ENST00000479930 RFTN1Q14699 578 aaPredicted RBP8.35□□□□□ -1.07
TTC3-216ENST00000479930 SIX1Q15475 284 aaPredicted RBP8.35□□□□□ -1.07
TTC3-216ENST00000479930 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
TTC3-216ENST00000479930 HOPXQ9BPY8 73 aaPredicted RBP8.35□□□□□ -1.07
TTC3-216ENST00000479930 CHST6Q9GZX3 395 aa8.35□□□□□ -1.07
TTC3-216ENST00000479930 UBE2ZQ9H832 354 aaPredicted RBP8.35□□□□□ -1.07
TTC3-216ENST00000479930 INTS6Q9UL03 887 aaKnown RBP8.35□□□□□ -1.07
TTC3-216ENST00000479930 ATG4BQ9Y4P1 393 aa8.35□□□□□ -1.07
TTC3-216ENST00000479930 SETBP1Q9Y6X0 1596 aa8.35□□□□□ -1.07
TTC3-216ENST00000479930 TK1P04183 234 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 CRISP2P16562 243 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PRKACBP22694 351 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ABCD3P28288 659 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OR10A3P58181 314 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ARHGAP1Q07960 439 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ELFN2Q5R3F8 820 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ARL6IP6Q8N6S5 226 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PIK3IP1Q96FE7 263 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OR52A4PA6NMU1 304 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 H3BQF6 201 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 APEX1P27695 318 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 KCNQ1P51787 676 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PNLIPRP2P54317 469 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 STEAP1BQ6NZ63 245 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 XYLT1Q86Y38 959 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 RND1Q92730 232 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 KIAA1191Q96A73 305 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ZNF641Q96N77 438 aaPredicted RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 MYO3AQ8NEV4 1616 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PRR32B1ATL7 298 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 DOK2O60496 412 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 AADACP22760 399 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SLC6A8P48029 635 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 TP53I3Q53FA7 332 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 DHRS7BQ6IAN0 325 aaPredicted RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 POP5Q969H6 163 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 MACROD1Q9BQ69 325 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ALG8Q9BVK2 526 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 TECPR2O15040 1411 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ARPC4-TTLL3A0A0A6YYG9 625 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 MYADML2A6NDP7 307 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 BBIP1A8MTZ0 92 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SIRPB1O00241 398 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OMGP23515 440 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 GPR12P47775 334 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 AGTR2P50052 363 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PPP4CP60510 307 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 MAT1AQ00266 395 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 OR1J1Q8NGS3 322 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 C12orf43Q96C57 262 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 LAMB4A4D0S4 1761 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 NQO2P16083 231 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 GCSHP23434 173 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 PRSS8Q16651 343 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 NSUN5P1Q3KNT7 163 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 USP43Q70EL4 1123 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SPRED1Q7Z699 444 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SERPINA11Q86U17 422 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 RAB1CQ92928 201 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 TCEAL2Q9H3H9 227 aaPredicted RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 SIX2Q9NPC8 291 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 DDX4Q9NQI0 724 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 ZNF346Q9UL40 294 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 ARAP1Q96P48 1450 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SLC22A31A6NKX4 558 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 MATN3O15232 486 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 FURINP09958 794 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OR13C7P0DN81 318 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 IDH3AP50213 366 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ALX1Q15699 326 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 CLVS2Q5SYC1 327 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 SUMF2Q8NBJ7 301 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OR13C6PQ8NH95 151 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 USP22Q9UPT9 525 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 CYP1B1Q16678 543 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 TEX44Q53QW1 395 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 TMEM41BQ5BJD5 291 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 CEACAM19Q7Z692 300 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 CPXM2Q8N436 756 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OR2T4Q8NH00 348 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 OLIG1Q8TAK6 271 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ZNF420Q8TAQ5 688 aaPredicted RBP8.34□□□□□ -1.07
TTC3-216ENST00000479930 CCL19Q99731 98 aa8.34□□□□□ -1.07
TTC3-216ENST00000479930 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.08
TTC3-216ENST00000479930 SNX3O60493 162 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 UGT2A3Q6UWM9 527 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 NPSR1Q6W5P4 371 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.33□□□□□ -1.084e-10■■■■■ 31.1
TTC3-216ENST00000479930 OR8B3Q8NGG8 313 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 RHOXF1Q8NHV9 184 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 OR8B2Q96RD0 313 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
TTC3-216ENST00000479930 MUTYHQ9UIF7 546 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms