RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 OTX2P32243 289 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 MTNR1BP49286 362 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 RPS15P62841 145 aaKnown RBP13.21□□□□□ -0.29
COL20A1-206ENST00000479501 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-206ENST00000479501 GDPD3Q7L5L3 318 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 DCUN1D4Q92564 292 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 HLA-CQ95604 372 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 COX14Q96I36 57 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 FCRL1Q96LA6 429 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 PTPRFP10586 1907 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 H7C1C5 153 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 SGCEO43556 437 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 CCR5P51681 352 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 LCN6P62502 163 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 MLC1Q15049 377 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 NR0B2Q15466 257 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 XAF1Q6GPH4 301 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 ZNF546Q86UE3 836 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 SFTPA1Q8IWL2 248 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 AMER3Q8N944 861 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 RSPRY1Q96DX4 576 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 UNKLQ9H9P5 680 aaKnown RBP13.21□□□□□ -0.29
COL20A1-206ENST00000479501 ELOVL3Q9HB03 270 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 RPS10P5Q9NQ39 176 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 MOKQ9UQ07 419 aa13.21□□□□□ -0.29
COL20A1-206ENST00000479501 RPH3AQ9Y2J0 694 aaPredicted RBP13.21□□□□□ -0.29
COL20A1-206ENST00000479501 TRBV11-1A0A0K0K1C0 115 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 PEX14O75381 377 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 CSF1P09603 554 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 MAKP20794 623 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 TAGLNQ01995 201 aaKnown RBP13.21□□□□□ -0.3
COL20A1-206ENST00000479501 C14orf28Q4W4Y0 310 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 OR14K1Q8NGZ2 314 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 TM9SF4Q92544 642 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 APMAPQ9HDC9 416 aa13.21□□□□□ -0.3
COL20A1-206ENST00000479501 ARID1AO14497 2285 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 KCNK2O95069 426 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 TGM6O95932 706 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SBK2P0C263 348 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 OR7E24Q6IFN5 339 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF511Q8NB15 262 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SYNPRQ8TBG9 265 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 HHLA2Q9UM44 414 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 A0A087WV62 115 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SMLR1H3BR10 107 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 FZD7O75084 574 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF254O75437 659 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 OPN1LWP04000 364 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 S100PP25815 95 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 C21orf58P58505 322 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 POU3F1Q03052 451 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 HYAL1Q12794 435 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 CTF1Q16619 201 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 VASNQ6EMK4 673 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 PTCRAQ6ISU1 281 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 DPY19L4Q7Z388 723 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 ARSGQ96EG1 525 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 CSF3RQ99062 836 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 LDAHQ9H6V9 325 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 PTRH2Q9Y3E5 179 aaKnown RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 PTPRZ1P23471 2315 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SULT2B1O00204 365 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SNRPBP14678 240 aaKnown RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SQSTM1Q13501 440 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SFXN4Q6P4A7 337 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 PXKQ7Z7A4 578 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SVBPQ8N300 66 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 OR1J4Q8NGS1 313 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 Q96M85 177 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 TXNL1O43396 289 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 ADAM23O75077 832 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 IL33O95760 270 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 UBBP0CG47 229 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 UBCP0CG48 685 aaKnown RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 TRAPPC2P0DI81 140 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 TRAPPC2BP0DI82 140 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 GNRHRP30968 328 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 APOOLQ6UXV4 268 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 SCGB1C1Q8TD33 95 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF587Q96SQ5 575 aaPredicted RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 RBM24Q9BX46 236 aaKnown RBP13.2□□□□□ -0.3
COL20A1-206ENST00000479501 KCNE3Q9Y6H6 103 aa13.2□□□□□ -0.3
COL20A1-206ENST00000479501 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 A0A1W2PPC4 97 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 ZNF736B4DX44 427 aaPredicted RBP13.19□□□□□ -0.3
COL20A1-206ENST00000479501 GREM1O60565 184 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SCRG1O75711 98 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 SNAPINO95295 136 aa13.19□□□□□ -0.3
COL20A1-206ENST00000479501 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms