RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 HS6ST3Q8IZP7 471 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 NUDCD2Q8WVJ2 157 aa19.48■□□□□ 0.71
SDF4-206ENST00000478938 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.47■□□□□ 0.71
SDF4-206ENST00000478938 GLSO94925 669 aaPredicted RBP19.47■□□□□ 0.71
SDF4-206ENST00000478938 CD3DP04234 171 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 HOXB5P09067 269 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 LIPCP11150 499 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 TPT1P13693 172 aaKnown RBP19.47■□□□□ 0.71
SDF4-206ENST00000478938 PGAM2P15259 253 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 HOXA5P20719 270 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 PPP2R1BP30154 601 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 PMELP40967 661 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 ZNF177Q13360 481 aaPredicted RBP19.47■□□□□ 0.71
SDF4-206ENST00000478938 TAAR9Q96RI9 348 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 C20orf24Q9BUV8 137 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 ZDHHC5Q9C0B5 715 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 TMEM202A6NGA9 273 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 KLF4O43474 513 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 PMS2P2O95744 297 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 SLC25A27O95847 323 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 IMPA1P29218 277 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 AWAT1Q58HT5 328 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 PRSS55Q6UWB4 352 aaPredicted RBP19.47■□□□□ 0.71
SDF4-206ENST00000478938 BAP18Q8IXM2 172 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 PELI1Q96FA3 418 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 C1orf198Q9H425 327 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 SMOC1Q9H4F8 434 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 NCDNQ9UBB6 729 aa19.47■□□□□ 0.71
SDF4-206ENST00000478938 MCIDASD6RGH6 385 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 OR10H2O60403 315 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 CTNSO60931 367 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 RAB40ALP0C0E4 278 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 AQP2P41181 271 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 COL9A2Q14055 689 aaPredicted RBP19.46■□□□□ 0.71
SDF4-206ENST00000478938 ARL14Q8N4G2 192 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 PAQR4Q8N4S7 273 aaPredicted RBP19.46■□□□□ 0.71
SDF4-206ENST00000478938 CYB561A3Q8NBI2 242 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 OR4K14Q8NGD5 310 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 RAB40AQ8WXH6 277 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 MFRPQ9BY79 579 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 FN3KRPQ9HA64 309 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 TRBV2A0A0J9YWF9 115 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 M0QZQ0 153 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 RTCAO00442 366 aaKnown RBP19.46■□□□□ 0.71
SDF4-206ENST00000478938 ARG1P05089 322 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 CD34P28906 385 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 PSMB10P40306 273 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 FUT5Q11128 374 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 ZNF740Q8NDX6 193 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 OR5T3Q8NGG3 340 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 OR10D4PQ8NGN7 298 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 SLC35G5Q96KT7 338 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 OR52D1Q9H346 318 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 TRPV4Q9HBA0 871 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 NOP16Q9Y3C1 178 aaKnown RBP19.46■□□□□ 0.71
SDF4-206ENST00000478938 CASP8AP2Q9UKL3 1982 aa19.46■□□□□ 0.71
SDF4-206ENST00000478938 C7orf77A4D0Y5 90 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 NPIPB15A6NHN6 443 aaPredicted RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 BLOC1S5-TXNDC5H3BN57 136 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 THY1P04216 161 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 EPCAMP16422 314 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 FXYD6P3P58550 94 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 LSM6P62312 80 aaKnown RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 HTRA4P83105 476 aaPredicted RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 ST3GAL3Q11203 375 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 USF2Q15853 346 aaPredicted RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 SLC30A7Q8NEW0 376 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 MIB2Q96AX9 1013 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 SULT4A1Q9BR01 284 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 TEX101Q9BY14 249 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 SEMA6CQ9H3T2 930 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 LHX9Q9NQ69 397 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 GAR1Q9NY12 217 aaKnown RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 RBPJLQ9UBG7 517 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 LPAR3Q9UBY5 353 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 V9GY05 133 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 MBLAC1A4D2B0 266 aaPredicted RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 ZNF197O14709 1029 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 OGG1O15527 345 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 CD14P08571 375 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 CSF1P09603 554 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 AKAIN1P0CW23 69 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 G0S2P27469 103 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 CD1CP29017 333 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 CDX1P47902 265 aaPredicted RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 GSK3AP49840 483 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 RSU1Q15404 277 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 NSUN5P2Q63ZY6 315 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 TAS1R1Q7RTX1 841 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 UBAC2Q8NBM4 344 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 OR6J1Q8NGC5 347 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 ZG16BQ96DA0 208 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 F2RL3Q96RI0 385 aa19.45■□□□□ 0.7
SDF4-206ENST00000478938 DUSP15Q9H1R2 295 aaPredicted RBP19.45■□□□□ 0.7
SDF4-206ENST00000478938 SLC22A31A6NKX4 558 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 H7C1Q1 480 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 EDNRAP25101 427 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 PRKAG1P54619 331 aa19.44■□□□□ 0.7
SDF4-206ENST00000478938 KIAA0141Q14154 515 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms