RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 NRARPQ7Z6K4 114 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 LRRC18Q8N456 261 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 BCORP1Q8N888 145 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 CNEP1R1Q8N9A8 125 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 C8orf44Q96CB5 159 aa13.08□□□□□ -0.32
NPHP4-208ENST00000478423 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 MEIOCA2RUB1 952 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 TSPAN4O14817 238 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ARPC1BO15143 372 aaKnown RBP13.07□□□□□ -0.32
NPHP4-208ENST00000478423 IGHEP01854 428 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 LTBQ06643 244 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 CALHM3Q86XJ0 350 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 OR14A2Q96R54 314 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ADAM18Q9Y3Q7 739 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 KNG1P01042 644 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 EIF1P41567 113 aaKnown RBP13.07□□□□□ -0.32
NPHP4-208ENST00000478423 CXADRP78310 365 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 SLC35A1P78382 337 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 AIMP2Q13155 320 aaKnown RBP13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ZNF793Q6ZN11 406 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 FAM57BQ71RH2 274 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ESX1Q8N693 406 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 GIMAP5Q96F15 307 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 SLC38A1Q9H2H9 487 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 COL11A1P12107 1806 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ALPK2Q86TB3 2170 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 LOC102725191A0A1B0GVB3 256 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 NAP1L6A6NFF2 107 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 FZD7O75084 574 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 COL9A1P20849 921 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 APLNRP35414 380 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 CASP6P55212 293 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 HBMQ6B0K9 141 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 CFAP77Q6ZQR2 320 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 PM20D2Q8IYS1 436 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 HMGCLL1Q8TB92 370 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ST6GALNAC5Q9BVH7 336 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 EMC3Q9P0I2 261 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 UBE2J1Q9Y385 318 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-208ENST00000478423 KCNE1BA0A087WTH5 132 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 DOK2O60496 412 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 SLC22A5O76082 557 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 HRGP04196 525 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 WNT3P56703 355 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 Q499Y3 187 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 NIPAL3Q6P499 406 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ADGRF3Q8IZF5 1079 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 AMER3Q8N944 861 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 DPCDQ9BVM2 203 aaPredicted RBP13.07□□□□□ -0.32
NPHP4-208ENST00000478423 GABARAPL1Q9H0R8 117 aa13.07□□□□□ -0.32
NPHP4-208ENST00000478423 ZNFX1Q9P2E3 1918 aaKnown RBP13.06□□□□□ -0.32
NPHP4-208ENST00000478423 H3BUI4 141 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 CTSVO60911 334 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 RAB40ALP0C0E4 278 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 CD34P28906 385 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 YOD1Q5VVQ6 348 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-208ENST00000478423 SFXN4Q6P4A7 337 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 COX15Q7KZN9 410 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 SUN5Q8TC36 379 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 RAB40AQ8WXH6 277 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 RCE1Q9Y256 329 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-208ENST00000478423 M0R082 166 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 PAPLNO95428 1278 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 SLC2A10O95528 541 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 NR4A2P43354 598 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 SLC26A5P58743 744 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 GNMTQ14749 295 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 METTL11BQ5VVY1 283 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 PAQR6Q6TCH4 344 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 PHC2Q8IXK0 858 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 UBALD2Q8IYN6 164 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 ASB12Q8WXK4 309 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 ITPKCQ96DU7 683 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 NOX4Q9NPH5 578 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 KCNN3Q9UGI6 736 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 TMPRSS11EQ9UL52 423 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 EMC9Q9Y3B6 208 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 WIF1Q9Y5W5 379 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 DDAH2O95865 285 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 CSF1P09603 554 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 FXYD4P59646 89 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 RAE1P78406 368 aaKnown RBP13.06□□□□□ -0.32
NPHP4-208ENST00000478423 FGFBP1Q14512 234 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 BEST4Q8NFU0 473 aa13.06□□□□□ -0.32
NPHP4-208ENST00000478423 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms