RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 ITGA5P08648 1049 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 GRPRP30550 384 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 NUDT2P50583 147 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC25A3Q00325 362 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 LIPEQ05469 1076 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZP4Q12836 540 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 C1DQ13901 141 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 GABRA6Q16445 453 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 SPATS1Q496A3 300 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 CYBRD1Q53TN4 286 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 TSPO2Q5TGU0 170 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 KLHL17Q6TDP4 642 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 PXKQ7Z7A4 578 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 CARM1Q86X55 608 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 TREML1Q86YW5 311 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 UEVLDQ8IX04 471 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 OR5J2Q8NH18 312 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZNF417Q8TAU3 575 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 RNF217Q8TC41 542 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 MAGEE2Q8TD90 523 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 LRRC37BQ96QE4 947 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZNF587Q96SQ5 575 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 C1QTNF6Q9BXI9 259 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 SPAG4Q9NPE6 437 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC7A10Q9NS82 523 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 NDE1Q9NXR1 346 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZNF229Q9UJW7 825 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 SH3GLB1Q9Y371 365 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 RNF115Q9Y4L5 304 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZFHX3Q15911 3703 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 CADP27708 2225 aa12.13□□□□□ -0.47
SOX2-OT-208ENST00000477928 ARID1AO14497 2285 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 TRIM64A6NGJ6 449 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 TRIM64BA6NI03 449 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 HS3ST1O14792 307 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 SMPD2O60906 423 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC43A1O75387 559 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 KRT33AO76009 404 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 LYPD3O95274 346 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 WNT11O96014 354 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 SOD3P08294 240 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 NQO1P15559 274 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 PAX1P15863 534 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 PTAFRP25105 342 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 MNAT1P51948 309 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC7A2P52569 658 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 TAS2R41P59536 307 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 PUDPQ08623 228 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 TMEM108Q6UXF1 575 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 CBLL1Q75N03 491 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 CCDC36Q8IYA8 594 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 KDM8Q8N371 416 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 PIK3C3Q8NEB9 887 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 OR4D11Q8NGI4 311 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 VANGL1Q8TAA9 524 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 FAM107BQ9H098 131 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC7A7Q9UM01 511 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC25A15Q9Y619 301 aa12.12□□□□□ -0.47
SOX2-OT-208ENST00000477928 ALPK2Q86TB3 2170 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 CXCR6O00574 342 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 NME4O00746 187 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 GSTA4O15217 222 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 MT-ND1P03886 318 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 CBLP22681 906 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 SELENOPP49908 381 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZNF83P51522 516 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 PRPS1P60891 318 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 PSME3P61289 254 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 ST3GAL3Q11203 375 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 PMS2P3Q13401 168 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZNF74Q16587 644 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 MS4A18Q3C1V0 323 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 SHEQ5VZ18 495 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 NIPAL3Q6P499 406 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 PRSS57Q6UWY2 283 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 RBM45Q8IUH3 476 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 LIPHQ8WWY8 451 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 GEMIN6Q8WXD5 167 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 PRRC1Q96M27 445 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 Q96MF0 132 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 KCTD14Q9BQ13 255 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 NANSQ9NR45 359 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 SLC17A5Q9NRA2 495 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 RPS6KA6Q9UK32 745 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 USP22Q9UPT9 525 aa12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-208ENST00000477928 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
SOX2-OT-208ENST00000477928 ZANQ9Y493 2812 aa12.1□□□□□ -0.47
SOX2-OT-208ENST00000477928 ARPC4-TTLL3A0A0A6YYG9 625 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms