RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZCWPW2A0A1B0GU75 182 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 A0A1W2PPV9 198 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 LRIT2A6NDA9 550 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 FABP12A6NFH5 140 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 GOLGA6L10A6NI86 522 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 E5RI56 91 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 H3BN98 237 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 KLRC4-KLRK1H3BQV0 150 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 H7C0C1 242 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 J3KR12 359 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 OVOL3O00110 214 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RFXAPO00287 272 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZBTB5O15062 677 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SIVA1O15304 175 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 AQP9O43315 295 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 LAMTOR5O43504 91 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SYNGR3O43761 229 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 PCDH7O60245 1069 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 NUAK1O60285 661 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SLC19A2O60779 497 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 UGT2B17O75795 530 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ATP5LO75964 103 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 WISP2O76076 250 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 LATS1O95835 1130 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 IGSF6O95976 241 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 IGHG3P01860 377 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 CRYABP02511 175 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 MMP1P03956 469 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 GAPDHP04406 335 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 IFNW1P05000 195 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 IFNA6P05013 189 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 IL6P05231 212 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 FAM106CPP0CH98 169 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 PRSS56P0CW18 603 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ADORA3P0DMS8 318 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 PRF1P14222 555 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 FASP25445 335 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 IVDP26440 423 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 GABRR2P28476 465 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 KDELR2P33947 212 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 UGT1A3P35503 534 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 UGT2B10P36537 528 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ARR3P36575 388 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ACVR1BP36896 505 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 AQP2P41181 271 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 CSNK1DP48730 415 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RGS6P49758 472 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RASSF2P50749 326 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RAP1GDS1P52306 607 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RAG2P55895 527 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZP1P60852 638 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 MRPS22P82650 360 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 PAX2Q02962 417 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RGS1Q08116 209 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 FZD5Q13467 585 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 KIR2DS5Q14953 304 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TMED2Q15363 201 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SHHQ15465 462 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TSC22D1Q15714 1073 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 HLA-BQ31612 363 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SLC25A52Q3SY17 297 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZNF672Q499Z4 452 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 ACCSLQ4AC99 568 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TP53I3Q53FA7 332 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 AKIRIN2Q53H80 203 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SAMD4BQ5PRF9 694 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 TPRG1LQ5T0D9 272 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 UTF1Q5T230 341 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 KHDRBS2Q5VWX1 349 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 PRR5LQ6MZQ0 368 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 STEAP1BQ6NZ63 245 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 PAQR6Q6TCH4 344 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 Q6ZNX1 250 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 C19orf35Q6ZS72 473 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SLC16A12Q6ZSM3 486 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 NCCRP1Q6ZVX7 275 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 Q71RC1 249 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 SSX6Q7RTT6 188 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ITIH5Q86UX2 942 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SLC13A5Q86YT5 568 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 ZC3H3Q8IXZ2 948 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 ZNF100Q8IYN0 542 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZNF34Q8IZ26 560 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 SPAG16Q8N0X2 631 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 EID3Q8N140 333 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 CLIP4Q8N3C7 705 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 LIX1Q8N485 282 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 KIF2BQ8N4N8 673 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ARFGAP1Q8N6T3 406 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 C15orf54Q8N8G6 183 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ADAD2Q8NCV1 583 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 OR5M9Q8NGP3 310 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 OR2L8Q8NGY9 312 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 OR52N5Q8NH56 324 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 OSR1Q8TAX0 266 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 FBXO25Q8TCJ0 367 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZNF473Q8WTR7 871 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 RNF133Q8WVZ7 376 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TM9SF4Q92544 642 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms