RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 LCORQ96JN0 433 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 OR2M4Q96R27 311 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MBOAT4Q96T53 435 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SYT11Q9BT88 431 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 RNF26Q9BY78 433 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 KATNBL1Q9H079 304 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ARV1Q9H2C2 271 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 UBQLN3Q9H347 655 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 LMAN1LQ9HAT1 526 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 BARX1Q9HBU1 254 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CSNK1G1Q9HCP0 422 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ISYNA1Q9NPH2 558 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MBNL3Q9NUK0 354 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 RLIMQ9NVW2 624 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MRPL22Q9NWU5 206 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 C2orf42Q9NWW7 574 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 WNT16Q9UBV4 365 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SIX4Q9UIU6 781 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ADAM29Q9UKF5 820 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 UBQLN1Q9UMX0 589 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PPP1R3CQ9UQK1 317 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SLC22A13Q9Y226 551 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ANGPT4Q9Y264 503 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 EXOGQ9Y2C4 368 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MMP24Q9Y5R2 645 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 KIAA1551Q9HCM1 1747 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CROCCQ5TZA2 2017 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ECM29Q5VYK3 1845 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 IGSF9BQ9UPX0 1349 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 LAMB1P07942 1786 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TRAV19A0A0A6YYK7 116 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM269A0A1B0GVZ9 245 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 A0A1W2PQL4 384 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TRBC2A0A5B9 178 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SMCO3A2RU48 225 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 A4D1N5 150 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CLEC18AA5D8T8 446 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ZNF726A6NNF4 738 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MCRIP1C9JLW8 97 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PLRG1O43660 514 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 NARSO43776 548 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 KIAA0513O60268 411 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PRAF2O60831 178 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 FAM20BO75063 409 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SH3BGRLO75368 114 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 RGS11O94810 467 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TOX4O94842 621 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PMP2P02689 132 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 RNASE1P07998 156 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 IL6RP08887 468 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ALPPL2P10696 532 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ZNF35P13682 527 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 F3P13726 295 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 GCH1P30793 250 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SSTR1P30872 391 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SDC2P34741 201 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TGFBR1P36897 503 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CASRP41180 1078 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MRPL19P49406 292 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ATP4BP51164 291 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ZNF41P51814 821 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SLC37A1P57057 533 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TAS2R38P59533 333 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ARF3P61204 181 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 RAP2BP61225 183 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ARF1P84077 181 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CRHR2Q13324 411 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 RCAN2Q14206 197 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CYP51A1Q16850 503 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PTCHD3Q3KNS1 767 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 NKAIN2Q5VXU1 208 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CAPN13Q6MZZ7 669 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MTFR2Q6P444 385 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 C19orf48Q6RUI8 117 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM270Q6UE05 265 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 LARP4Q71RC2 724 aaKnown RBP eCLIP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 KCTD9Q7L273 389 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 B3GNT8Q7Z7M8 397 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 LYG2Q86SG7 212 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PIM3Q86V86 326 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 PTOV1Q86YD1 416 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 LAX1Q8IWV1 398 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 NRMQ8IXM6 262 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ZNF444Q8N0Y2 327 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 CLEC18CQ8NCF0 446 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM161BQ8NDZ6 487 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 DNERQ8NFT8 737 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 OR10W1Q8NGF6 305 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 SPPL2AQ8TCT8 520 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ABHD3Q8WU67 409 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ZCCHC14Q8WYQ9 949 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 C11orf40Q8WZ69 217 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ZBED6CLQ96FA7 236 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TGM7Q96PF1 710 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 OR8B4Q96RC9 309 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 FAM110AQ9BQ89 295 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 TMEM47Q9BQJ4 181 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 REEP2Q9BRK0 252 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 MSTO1Q9BUK6 570 aa5.48□□□□□ -1.53
ECHDC1-215ENST00000475319 ELOVL1Q9BW60 279 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms