RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 SPIN1Q9Y657 262 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-216ENST00000474637 A0A1W2PQL4 384 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PPM1BO75688 479 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 NEURL1O76050 574 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 OR7A10O76100 309 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ZIC2O95409 532 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TSPAN19P0C672 248 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 IL7P13232 177 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 CPEP16870 476 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 MYL12AP19105 171 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 GSTM3P21266 225 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 CNR1P21554 472 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 LCN1P31025 176 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SDC2P34741 201 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 MTNR1AP48039 350 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ANXA11P50995 505 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 NR0B1P51843 470 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 GAS1P54826 345 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PSMD4P55036 377 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 CAV3P56539 151 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 WNT4P56705 351 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 DBPQ10586 325 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ST3GAL3Q11203 375 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 GPR50Q13585 617 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 KRR1Q13601 381 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 GNA13Q14344 377 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 LARS2Q15031 903 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 NTRK2Q16620 822 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF791Q3KP31 576 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TOR2AQ5JU69 321 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 RNLSQ5VYX0 342 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC22A10Q63ZE4 541 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SPINK14Q6IE38 97 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TYW3Q6IPR3 259 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM81Q6P7N7 255 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 IL20RBQ6UXL0 311 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TMPRSS11AQ6ZMR5 421 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF730Q6ZMV8 503 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 NUP54Q7Z3B4 507 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 LINC00471Q8N535 108 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ZFP41Q8N8Y5 198 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 CDRT4Q8N9R6 151 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 GALNT11Q8NCW6 608 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 OR7G2Q8NG99 324 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 OR8D4Q8NGM9 314 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM163Q8TC26 289 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ADAMTS15Q8TE58 950 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 DEDD2Q8WXF8 326 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 DACT3Q96B18 629 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TMCO6Q96DC7 493 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 RNFT2Q96EX2 444 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 VSTM2LQ96N03 204 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 MS4A4EQ96PG1 132 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SIGLEC12Q96PQ1 595 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM173AQ9BQD7 235 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 LMF2Q9BU23 707 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PINK1Q9BXM7 581 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SMURF1Q9HCE7 757 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ACOXLQ9NUZ1 547 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC13A4Q9UKG4 626 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 RALYQ9UKM9 306 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 NPFFR2Q9Y5X5 522 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 IGSF10Q6WRI0 2623 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 CIB4A0PJX0 185 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 LEUTXA8MZ59 168 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 I3L521 148 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ACOT7O00154 380 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PRODHO43272 600 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC2A10O95528 541 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 F10P00742 488 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 THY1P04216 161 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ACP2P11117 423 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 EDN3P14138 238 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PLA2G2AP14555 144 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 IL12BP29460 328 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ATP6V1E1P36543 226 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 CD79BP40259 229 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 OMPP47874 163 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 RFX2P48378 723 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PNLIPRP2P54317 469 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 RPS25P62851 125 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TAGLNQ01995 201 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 PLCXD2Q0VAA5 305 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 RAB40BQ12829 278 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 FAPQ12884 760 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TSPAN31Q12999 210 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 HNRNPA0Q13151 305 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 DUSP8Q13202 625 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SNTA1Q13424 505 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 TRAM2Q15035 370 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF79Q15937 498 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 DECR1Q16698 335 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ESCO2Q56NI9 601 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF468Q5VIY5 522 aaPredicted RBP3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC30A6Q6NXT4 461 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM131AQ6UXB0 335 aa3.79□□□□□ -1.8
GAPVD1-216ENST00000474637 B3GLCTQ6Y288 498 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms