RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NPIPB13A6NJU9 1138 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 C4orf47A7E2U8 309 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 PRR32B1ATL7 298 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 NPIPB4C9JG80 1138 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 SLC19A2O60779 497 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
USP39-214ENST00000474572 SLC25A12O75746 678 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 WISP1O95388 367 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 ABHD16AO95870 558 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 HIST1H2ABP04908 130 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 CFIP05156 583 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 CSF3P09919 207 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 UCHL1P09936 223 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 PRKCAP17252 672 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 MYL9P24844 172 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 ITPKBP27987 946 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 SHC1P29353 583 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 PYCR1P32322 319 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 PTGDSP41222 190 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 HCCSP53701 268 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 RPS11P62280 158 aaKnown RBP eCLIP8.88□□□□□ -0.99
USP39-214ENST00000474572 SIRPAP78324 504 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 SLC3A1Q07837 685 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 ZP4Q12836 540 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 ASAH1Q13510 395 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 COL28A1Q2UY09 1125 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 ACSM3Q53FZ2 586 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 C1orf140Q5VVS0 124 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 C1QL3Q5VWW1 255 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 SLC6A19Q695T7 634 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 LCN10Q6JVE6 187 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 FAM131AQ6UXB0 335 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 CCBE1Q6UXH8 406 aaPredicted RBP8.88□□□□□ -0.99
USP39-214ENST00000474572 RPTNQ6XPR3 784 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 HIST3H2AQ7L7L0 130 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 KCTD20Q7Z5Y7 419 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 CDC20BQ86Y33 519 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 C10orf53Q8N6V4 93 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 OR51L1Q8NGJ5 315 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 OR5L2Q8NGL0 311 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 OR2T4Q8NH00 348 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 THAP4Q8WY91 577 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 TMEM234Q8WY98 164 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 GHSRQ92847 366 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 HIST1H2ACQ93077 130 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 DIRAS2Q96HU8 199 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 TXNDC15Q96J42 360 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 DEPDC7Q96QD5 511 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 MESP1Q9BRJ9 268 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 FANCFQ9NPI8 374 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 RPRD1BQ9NQG5 326 aaKnown RBP8.88□□□□□ -0.99
USP39-214ENST00000474572 RXFP3Q9NSD7 469 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 C14orf119Q9NWQ9 140 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 MRPL39Q9NYK5 338 aaKnown RBP8.88□□□□□ -0.99
USP39-214ENST00000474572 VSX1Q9NZR4 365 aaPredicted RBP8.88□□□□□ -0.99
USP39-214ENST00000474572 GRHPRQ9UBQ7 328 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 ADAM30Q9UKF2 790 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 NXT1Q9UKK6 140 aaKnown RBP8.88□□□□□ -0.99
USP39-214ENST00000474572 FKBP7Q9Y680 259 aa8.88□□□□□ -0.99
USP39-214ENST00000474572 A0A1W2PQ72 361 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 SMIM30A4D0T7 59 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 PATE3B3GLJ2 98 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 BOLA2-SMG1P6H3BVE0 249 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 MEN1O00255 615 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 DCTN6O00399 190 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ZNF208O43345 1280 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 OR2T1O43869 369 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 HPGDSO60760 199 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 TMEM127O75204 238 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 UPK3AO75631 287 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 NCR1O76036 304 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ZFAND5O76080 213 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 RENP00797 406 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 APOA1P02647 267 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 F13BP05160 661 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 FBXO45P0C2W1 286 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ZNF883P0CG24 379 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 APEX1P27695 318 aaKnown RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 MSX1P28360 303 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ACVR1BP36896 505 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 APOBEC1P41238 236 aaKnown RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 RFX2P48378 723 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 CENPAP49450 140 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 TMED10P49755 219 aaKnown RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 MAP2K6P52564 334 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 FBXW4P57775 412 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 RPL27P61353 136 aaKnown RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 DAB2P98082 770 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 MC2RQ01718 297 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 PCOLCEQ15113 449 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 SFXN4Q6P4A7 337 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 TMEM81Q6P7N7 255 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 CNIH2Q6PI25 160 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 FAM198BQ6UWH4 519 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 LYPD4Q6UWN0 246 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 ZNF517Q6ZMY9 492 aaPredicted RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 DBX2Q6ZNG2 339 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 C16orf47Q6ZP98 133 aaPredicted RBP8.87□□□□□ -0.99
USP39-214ENST00000474572 CEACAM19Q7Z692 300 aa8.87□□□□□ -0.99
USP39-214ENST00000474572 LRRC28Q86X40 367 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms