RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 A0A0B4J293 547 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 TRAPPC13A5PLN9 417 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 ZNF264O43296 627 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 SEC14L5O43304 696 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 ITGA10O75578 1167 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 FBXO45P0C2W1 286 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 LIPCP11150 499 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 GABRB1P18505 474 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 LIPAP38571 399 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 CHAF1BQ13112 559 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 SKP2Q13309 424 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 IRF3Q14653 427 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 KLHL17Q6TDP4 642 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 TFAP2EQ6VUC0 442 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 CFAP77Q6ZQR2 320 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 NUP54Q7Z3B4 507 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 MARCH3Q86UD3 253 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 P3H2Q8IVL5 708 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 OR8H3Q8N146 312 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 ARMC10Q8N2F6 343 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 ZCCHC14Q8WYQ9 949 aaKnown RBP13.46□□□□□ -0.25
LMNA-213ENST00000473598 KIAA1143Q96AT1 154 aaPredicted RBP13.46□□□□□ -0.25
LMNA-213ENST00000473598 KLHL15Q96M94 604 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 PCDHB16Q9NRJ7 776 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 PLCXD1Q9NUJ7 323 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 ZNF226Q9NYT6 803 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 RAXQ9Y2V3 346 aa13.46□□□□□ -0.25
LMNA-213ENST00000473598 TUBAL3A6NHL2 446 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 GTPBP1O00178 669 aaKnown RBP13.46□□□□□ -0.26
LMNA-213ENST00000473598 ADAP00813 363 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 LCKP06239 509 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.26
LMNA-213ENST00000473598 CENPAP49450 140 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 SRSF6Q13247 344 aaKnown RBP13.46□□□□□ -0.26
LMNA-213ENST00000473598 PTGES3Q15185 160 aaKnown RBP13.46□□□□□ -0.26
LMNA-213ENST00000473598 ZMYND11Q15326 602 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 COL28A1Q2UY09 1125 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 FAM209BQ5JX69 171 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 ZNF613Q6PF04 617 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 LINC00471Q8N535 108 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 OR5M3Q8NGP4 307 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 RBPMSQ93062 196 aaKnown RBP13.46□□□□□ -0.26
LMNA-213ENST00000473598 ARSGQ96EG1 525 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 SGTBQ96EQ0 304 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 IP6K3Q96PC2 410 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 TRIM2Q9C040 744 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 CDCP1Q9H5V8 836 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 TMEM27Q9HBJ8 222 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 DKK4Q9UBT3 224 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 SLC7A7Q9UM01 511 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 YARS2Q9Y2Z4 477 aaKnown RBP13.46□□□□□ -0.26
LMNA-213ENST00000473598 PCNX3Q9H6A9 2034 aa13.46□□□□□ -0.26
LMNA-213ENST00000473598 EML6Q6ZMW3 1958 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 CIB4A0PJX0 185 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 OR10H3O60404 316 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 GMDSO60547 372 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 TP53P04637 393 aaPredicted RBP13.45□□□□□ -0.26
LMNA-213ENST00000473598 CLEC2LP0C7M8 214 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 TNFSF8P32971 234 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 TSC22D1Q15714 1073 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 TBCEQ15813 527 aaPredicted RBP13.45□□□□□ -0.26
LMNA-213ENST00000473598 NTRK2Q16620 822 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 SLC35F1Q5T1Q4 408 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 GPR139Q6DWJ6 353 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 CBLN3Q6UW01 205 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 RPS19BP1Q86WX3 136 aaKnown RBP13.45□□□□□ -0.26
LMNA-213ENST00000473598 NKAIN4Q8IVV8 208 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 ENKURQ8TC29 256 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 SPACA9Q96E40 222 aaPredicted RBP13.45□□□□□ -0.26
LMNA-213ENST00000473598 CNTNAP3BQ96NU0 1288 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 WDFY2Q96P53 400 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 LAT2Q9GZY6 243 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 SMURF1Q9HCE7 757 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 PSORS1C1Q9UIG5 152 aa13.45□□□□□ -0.26
LMNA-213ENST00000473598 URB1O60287 2271 aaKnown RBP13.45□□□□□ -0.26
LMNA-213ENST00000473598 A0A087WUU8 490 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 A0A0B4J2E0 115 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 A0A1B0GX12 115 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 RPS10-NUDT3A0A1W2PQS6 291 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 ZAR1LA6NP61 321 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 OIP5O43482 229 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 SERPINA7P05543 415 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 TPOP07202 933 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 LIFP15018 202 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 SOX3P41225 446 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 CRISP1P54107 249 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 MLF1P58340 268 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 ZNF117Q03924 483 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 MRPL28Q13084 256 aaKnown RBP13.44□□□□□ -0.26
LMNA-213ENST00000473598 BTN1A1Q13410 526 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 FCRLBQ6BAA4 426 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 H3F3CQ6NXT2 135 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 AHSA2Q719I0 299 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 OR4K5Q8NGD3 323 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 RNF138Q8WVD3 245 aa13.44□□□□□ -0.26
LMNA-213ENST00000473598 PRSS27Q9BQR3 290 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms