RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 GORASP2Q9H8Y8 452 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 GIN1Q9NXP7 522 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 KCNIP3Q9Y2W7 256 aa3.39□□□□□ -1.87
CLK1-209ENST00000472679 IGKV2D-24A0A075B6R9 120 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 C12orf71A8MTZ7 269 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 SS18L1O75177 396 aaPredicted RBP3.38□□□□□ -1.87
CLK1-209ENST00000472679 PNMA6AP0CW24 399 aaPredicted RBP3.38□□□□□ -1.87
CLK1-209ENST00000472679 TBPP20226 339 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 MAGP20916 626 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 CMA1P23946 247 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 CCT3P49368 545 aaKnown RBP3.38□□□□□ -1.87
CLK1-209ENST00000472679 ATP1B3P54709 279 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 HERVK_113P61574 105 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 KLHL38Q2WGJ6 581 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 FILIP1LQ4L180 1135 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 LCN12Q6JVE5 192 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 LINC01551Q86U37 167 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 TRIM69Q86WT6 500 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 OR52M1Q8NGK5 317 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 OR5D13Q8NGL4 314 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 LRRC58Q96CX6 371 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 CEP170P1Q96L14 293 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 TMEM43Q9BTV4 400 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 LY9Q9HBG7 655 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 BFARQ9NZS9 450 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 ZNFX1Q9P2E3 1918 aaKnown RBP3.38□□□□□ -1.87
CLK1-209ENST00000472679 ASTN1O14525 1302 aa3.38□□□□□ -1.87
CLK1-209ENST00000472679 OR5B21A6NL26 309 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 DLGAP1O14490 977 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 SUPT3HO75486 399 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 RHOBTB1O94844 696 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 UBE2HP62256 183 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 FGL1Q08830 312 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 TAF7Q15545 349 aaPredicted RBP3.37□□□□□ -1.87
CLK1-209ENST00000472679 EXOC3L2Q2M3D2 409 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 RFX4Q33E94 735 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 OR52W1Q6IF63 320 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 UQCC3Q6UW78 93 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 Q6ZPB1 254 aaPredicted RBP3.37□□□□□ -1.87
CLK1-209ENST00000472679 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 FNDC5Q8NAU1 212 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 ZNF596Q8TC21 504 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 SCFD1Q8WVM8 642 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 DNTTIP1Q9H147 329 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 CALYQ9NYX4 217 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 ADAM28Q9UKQ2 775 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 TBX21Q9UL17 535 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 CDH9Q9ULB4 789 aa3.37□□□□□ -1.87
CLK1-209ENST00000472679 LRP4O75096 1905 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 MTX2O75431 263 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 ZNF324O75467 553 aaPredicted RBP3.36□□□□□ -1.87
CLK1-209ENST00000472679 SPAG6O75602 509 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 IGLV2-23P01705 113 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 ALDOBP05062 364 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 SLC26A3P40879 764 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 MAGEA8P43361 318 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 FZD2Q14332 565 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 GUCA2BQ16661 112 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 KCTD19Q17RG1 926 aaPredicted RBP3.36□□□□□ -1.87
CLK1-209ENST00000472679 MCOLN3Q8TDD5 553 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 C10orf35Q96D05 121 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 GBA3Q9H227 469 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 TPK1Q9H3S4 243 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 GLRX2Q9NS18 164 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 ZNF226Q9NYT6 803 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 SPATA7Q9P0W8 599 aa3.36□□□□□ -1.87
CLK1-209ENST00000472679 SLC31A2O15432 143 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 TOM1O60784 492 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 CAPN1P07384 714 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 CXCL5P42830 114 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 RPS9P46781 194 aaKnown RBP3.35□□□□□ -1.87
CLK1-209ENST00000472679 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
CLK1-209ENST00000472679 PFN3P60673 137 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 SGCAQ16586 387 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 TMEM183BQ1AE95 376 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 TMEM255AQ5JRV8 349 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 ENPP6Q6UWR7 440 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 TMEM183AQ8IXX5 376 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 CCDC54Q8NEL0 328 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 OR2G3Q8NGZ4 309 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.35□□□□□ -1.87
CLK1-209ENST00000472679 ASB9Q96DX5 294 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 RPRD1AQ96P16 312 aaPredicted RBP3.35□□□□□ -1.87
CLK1-209ENST00000472679 COPS8Q99627 209 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 RANBP3Q9H6Z4 567 aaPredicted RBP3.35□□□□□ -1.87
CLK1-209ENST00000472679 SLCO1B3Q9NPD5 702 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 CYTL1Q9NRR1 136 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
CLK1-209ENST00000472679 DDX49Q9Y6V7 483 aaKnown RBP3.35□□□□□ -1.87
CLK1-209ENST00000472679 C15orf38-AP3S2A0A0A6YYH1 394 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 ZNF208O43345 1280 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 CD5LO43866 347 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 PLEKP08567 350 aaPredicted RBP3.34□□□□□ -1.87
CLK1-209ENST00000472679 HPGDP15428 266 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 CNR1P21554 472 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 GLRA2P23416 452 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 ZNF136P52737 540 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 PDK3Q15120 406 aa3.34□□□□□ -1.87
CLK1-209ENST00000472679 PLA2G4DQ86XP0 818 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms