RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CBFBQ13951 182 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TRAM2Q15035 370 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 QPRTQ15274 297 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZSWIM7Q19AV6 140 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF766Q5HY98 468 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ALG10BQ5I7T1 473 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 FAM209BQ5JX69 171 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 COLEC12Q5KU26 742 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 WBP2NLQ6ICG8 309 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 MZT2AQ6P582 158 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PODNL1Q6PEZ8 512 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TTC33Q6PID6 262 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ARSKQ6UWY0 536 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF730Q6ZMV8 503 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PIWIL3Q7Z3Z3 882 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 GALNTL5Q7Z4T8 443 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 KCTD20Q7Z5Y7 419 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 GALNT5Q7Z7M9 940 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 YRDCQ86U90 279 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PLCZ1Q86YW0 608 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 MISPQ8IVT2 679 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 GPALPP1Q8IXQ4 340 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF440Q8IYI8 595 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 DND1Q8IYX4 353 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZADH2Q8N4Q0 377 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CBR4Q8N4T8 237 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 C10orf53Q8N6V4 93 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ATG16L2Q8NAA4 619 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 OR1J4Q8NGS1 313 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 OR5W2Q8NH69 310 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 MAGEE2Q8TD90 523 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 GPR119Q8TDV5 335 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ADAMTS16Q8TE57 1224 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PAQR8Q8TEZ7 354 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 GIPC3Q8TF64 312 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PHF10Q8WUB8 498 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC38A4Q969I6 547 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 EME1Q96AY2 570 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 SGCZQ96LD1 299 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PRRC1Q96M27 445 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC29A1Q99808 456 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CIB1Q99828 191 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ANGPTL4Q9BY76 406 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TRIM2Q9C040 744 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 KLHL4Q9C0H6 718 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 DEFB127Q9H1M4 99 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PTGES2Q9H7Z7 377 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 NMNAT1Q9HAN9 279 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 NTN4Q9HB63 628 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PROK2Q9HC23 129 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 HEYLQ9NQ87 328 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF71Q9NQZ8 489 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 AGPAT4Q9NRZ5 378 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ACER3Q9NUN7 267 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TUBA8Q9NY65 449 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TAS2R10Q9NYW0 307 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CNIH4Q9P003 139 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 C6orf203Q9P0P8 240 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 KIF17Q9P2E2 1029 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 DKK4Q9UBT3 224 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ING1Q9UK53 422 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 DKKL1Q9UK85 242 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 FBXL2Q9UKC9 423 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 A4GNTQ9UNA3 340 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CSAG2Q9Y5P2 127 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 WIF1Q9Y5W5 379 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CHCHD2Q9Y6H1 151 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A087WUU8 490 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMED7-TICAM2A0A0A6YYA0 188 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM72A0PK05 275 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 MKRN2OSH3BPM6 223 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 KLRC4-KLRK1H3BQV0 150 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 K7EM74 188 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 K7ENP7 123 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SOCS2O14508 198 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ADAMDEC1O15204 470 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 RGS10O43665 173 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PIP5K1CO60331 668 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 MITFO75030 526 aaPredicted RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 CBR3O75828 277 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 NEURL1O76050 574 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SNX4O95219 450 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 OR5F1O95221 314 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 CH25HO95992 272 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 NGFRP08138 427 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 RFPL3SP0C7P2 107 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PEPDP12955 493 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 IFI30P13284 250 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 HOXB6P17509 224 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 ELAVL4P26378 380 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 DPP4P27487 766 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 GDF1P27539 372 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 POU1F1P28069 291 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 VHLP40337 213 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 MAGEA2P43356 314 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC6A8P48029 635 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 DAPP51397 102 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 UGT2B15P54855 530 aa3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PPIAP62937 165 aaKnown RBP3.67□□□□□ -1.82
TMEM39A-204ENST00000468545 PMP22Q01453 160 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms