RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 MED8Q96G25 268 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 C16orf74Q96GX8 76 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 ITCHQ96J02 903 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 KCNA7Q96RP8 456 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 SLC29A1Q99808 456 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 ARHGDIGQ99819 225 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 RARRES2Q99969 163 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 PELOQ9BRX2 385 aaKnown RBP2.99□□□□□ -1.93
VPS13A-209ENST00000467124 NICN1Q9BSH3 213 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 FAIM2Q9BWQ8 316 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 EHD1Q9H4M9 534 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 TMEM185BQ9H7F4 350 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 VNN3Q9NY84 501 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 BTNL2Q9UIR0 455 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 VANGL2Q9ULK5 521 aa2.99□□□□□ -1.93
VPS13A-209ENST00000467124 WRBO00258 174 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 CLOCKO15516 846 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 SUPT7LO94864 414 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 GIPP09681 153 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-209ENST00000467124 FMO3P31513 532 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 BTDP43251 543 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 RGRP47804 291 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 RPS15P62841 145 aaKnown RBP2.98□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF763Q0D2J5 394 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 IDI1Q13907 227 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 DGUOKQ16854 277 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF630Q2M218 657 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-209ENST00000467124 VPS26BQ4G0F5 336 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 LY6G6FQ5SQ64 297 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 C1orf100Q5SVJ3 147 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 RAET1LQ5VY80 246 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 TRIM40Q6P9F5 258 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 Q6ZR54 194 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 EIF3MQ7L2H7 374 aaKnown RBP2.98□□□□□ -1.93
VPS13A-209ENST00000467124 PLA2G4DQ86XP0 818 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 MS4A15Q8N5U1 240 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 TRPV1Q8NER1 839 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 BBS1Q8NFJ9 593 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 OR2AP1Q8NGE2 309 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 OR1S2Q8NGQ3 325 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 ELMO1Q92556 727 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 SMARCD2Q92925 531 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 TSNARE1Q96NA8 513 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 ATP5SQ99766 215 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 C11orf70Q9BRQ4 267 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 C20orf85Q9H1P6 137 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 GBA3Q9H227 469 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 LY9Q9HBG7 655 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 TNFRSF19Q9NS68 423 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 IL17CQ9P0M4 197 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 LSM7Q9UK45 103 aaKnown RBP2.98□□□□□ -1.93
VPS13A-209ENST00000467124 NUP50Q9UKX7 468 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 MMP24Q9Y5R2 645 aa2.98□□□□□ -1.93
VPS13A-209ENST00000467124 IGLV3-10A0A075B6K4 115 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 EPOPA6NHQ4 379 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 NCF1BA6NI72 391 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-209ENST00000467124 LRRIQ4A6NIV6 560 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 NCF1CA8MVU1 366 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-209ENST00000467124 C9JVG2 144 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 CCL21O00585 134 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 RAB29O14966 203 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 CLIC3O95833 236 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 TSPAN13O95857 204 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF24P17028 368 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 COX7A1P24310 79 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 CD1BP29016 333 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 IFNA8P32881 189 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 ILKQ13418 452 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 ARFRP1Q13795 201 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 GNMTQ14749 295 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 ATP6AP1Q15904 470 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 KRTAP27-1Q3LI81 207 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 RNF212Q495C1 297 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 LCN12Q6JVE5 192 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 FBXL22Q6P050 247 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 RFLNAQ6ZTI6 216 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 GDPD3Q7L5L3 318 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 RALGPS2Q86X27 583 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-209ENST00000467124 TMEM61Q8N0U2 210 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 FBXL16Q8N461 479 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 CEP112Q8N8E3 955 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 PRRC1Q96M27 445 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 SORT1Q99523 831 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 CHP1Q99653 195 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 P2RY13Q9BPV8 354 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 C20orf24Q9BUV8 137 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 NIPAL2Q9H841 368 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 GLRX2Q9NS18 164 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 QPCTLQ9NXS2 382 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 TMEM9Q9P0T7 183 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 PACSIN2Q9UNF0 486 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-209ENST00000467124 ASF1AQ9Y294 204 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF256Q9Y2P7 627 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-209ENST00000467124 CNTNAP1P78357 1384 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 THSD7BQ9C0I4 1608 aa2.97□□□□□ -1.93
VPS13A-209ENST00000467124 PHF3Q92576 2039 aaKnown RBP2.97□□□□□ -1.93
VPS13A-209ENST00000467124 TMEM110-MUSTN1A8MSY1 372 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 C12orf77C9JDV5 145 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 E7ENQ6 273 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 AGPAT2O15120 278 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms