RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FABP3P05413 133 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 EPXP11678 715 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 HLA-DOBP13765 273 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 IGHV1-2P23083 117 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 PRKCDQ05655 676 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 ITGADQ13349 1161 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 TSPO2Q5TGU0 170 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 C22orf34Q6ZV56 151 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 MBOAT2Q6ZWT7 520 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 NRMQ8IXM6 262 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 WFIKKN1Q96NZ8 548 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 HDHD5Q9BXW7 423 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 MAGIXQ9H6Y5 334 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 SLC7A10Q9NS82 523 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 NOX1Q9Y5S8 564 aa17.94■□□□□ 0.46
SKA3-205ENST00000465471 ABCA12Q86UK0 2595 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 FAM221AA4D161 298 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 IGHV3-9P01782 118 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 ADORA3P0DMS8 318 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 PPP3CBP16298 524 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 FUT1P19526 365 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 SELENOPP49908 381 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 RASSF2P50749 326 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 FOXD4Q12950 439 aaPredicted RBP17.93■□□□□ 0.46
SKA3-205ENST00000465471 DAZAP2Q15038 168 aaPredicted RBP17.93■□□□□ 0.46
SKA3-205ENST00000465471 NANOGNBQ7Z5D8 188 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 ZDHHC21Q8IVQ6 265 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 UEVLDQ8IX04 471 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 POMGNT2Q8NAT1 580 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 MCUR1Q96AQ8 359 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 BPIFA2Q96DR5 249 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 SLCO5A1Q9H2Y9 848 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 NDRG3Q9UGV2 375 aa17.93■□□□□ 0.46
SKA3-205ENST00000465471 OR6C65A6NJZ3 312 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 CYSRT1A8MQ03 144 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 UMPSP11172 480 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 IFI30P13284 250 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 MAKP20794 623 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 SSTR2P30874 369 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 CLDN17P56750 224 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 RPS4XP62701 263 aaKnown RBP17.92■□□□□ 0.46
SKA3-205ENST00000465471 POU3F1Q03052 451 aaPredicted RBP17.92■□□□□ 0.46
SKA3-205ENST00000465471 C1DQ13901 141 aaKnown RBP17.92■□□□□ 0.46
SKA3-205ENST00000465471 NIPAL3Q6P499 406 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 PODNL1Q6PEZ8 512 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 TBPL2Q6SJ96 375 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 ZNF730Q6ZMV8 503 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 TMEM123Q8N131 208 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 ZNF433Q8N7K0 673 aaPredicted RBP17.92■□□□□ 0.46
SKA3-205ENST00000465471 STEAP2Q8NFT2 490 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 KISS1RQ969F8 398 aaPredicted RBP17.92■□□□□ 0.46
SKA3-205ENST00000465471 ZNF347Q96SE7 839 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 LINC00470Q9BZP3 86 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 ACTR6Q9GZN1 396 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 LRMDAQ9H2I8 198 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 ASB6Q9NWX5 421 aa17.92■□□□□ 0.46
SKA3-205ENST00000465471 TRBV4-1A0A0J9YWV2 114 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 AQP12BA6NM10 295 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 GOSR1O95249 250 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 THBDP07204 575 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 ITGA5P08648 1049 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 FOXG1P55316 489 aaPredicted RBP17.91■□□□□ 0.46
SKA3-205ENST00000465471 RPL18Q07020 188 aaKnown RBP17.91■□□□□ 0.46
SKA3-205ENST00000465471 FHL1Q13642 323 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 SEC23BQ15437 767 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 TSC22D1Q15714 1073 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 TMPRSS11FQ6ZWK6 438 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 WDFY1Q8IWB7 410 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 AQP12AQ8IXF9 295 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 UBE2J2Q8N2K1 259 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 ANKK1Q8NFD2 765 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 S100PBPQ96BU1 408 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 OR2M2Q96R28 347 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 SEPHS2Q99611 448 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 TRIM15Q9C019 465 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 TAS2R16Q9NYV7 291 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 SLC7A8Q9UHI5 535 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 POMPQ9Y244 141 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 HIF3AQ9Y2N7 669 aa17.91■□□□□ 0.46
SKA3-205ENST00000465471 HRNRQ86YZ3 2850 aaPredicted RBP17.91■□□□□ 0.46
SKA3-205ENST00000465471 CACNA1DQ01668 2161 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 ALPK2Q86TB3 2170 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 A6NNC1 897 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 AKAP8O43823 692 aaKnown RBP17.9■□□□□ 0.46
SKA3-205ENST00000465471 LYZL6O75951 148 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 OR6A2O95222 327 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 HIST1H2ABP04908 130 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 AHCYP23526 432 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 LIMS1P48059 325 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 SMIM11AP58511 58 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 IL1RL1Q01638 556 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 SPIBQ01892 262 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 TLE4Q04727 773 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 LGALS3BPQ08380 585 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 FAPQ12884 760 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 FGD3Q5JSP0 725 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 ANKRD34AQ69YU3 496 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 HIST3H2AQ7L7L0 130 aa17.9■□□□□ 0.46
SKA3-205ENST00000465471 BHLHA15Q7RTS1 189 aaPredicted RBP17.9■□□□□ 0.46
SKA3-205ENST00000465471 ADGRG5Q8IZF4 528 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms