RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 NELFAQ9H3P2 528 aa22.58■■□□□ 1.21
U2AF1-206ENST00000464750 MOKQ9UQ07 419 aa22.58■■□□□ 1.21
U2AF1-206ENST00000464750 CORINQ9Y5Q5 1042 aa22.58■■□□□ 1.21
U2AF1-206ENST00000464750 A0A096LPE4 126 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 IGHV1-18A0A0C4DH31 117 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 A0A1W2PPZ6 126 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 M0QX08 132 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 FMO6PO60774 539 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 BGLAPP02818 100 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 PCGF2P35227 344 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 TUBA1BP68363 451 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 TUBA4AP68366 448 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 DUSP7Q16829 419 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 ANKRD16Q6P6B7 361 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 DNM1P46Q6ZS02 220 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 TUBA1AQ71U36 451 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 SLC30A8Q8IWU4 369 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 UEVLDQ8IX04 471 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 OR10A6Q8NH74 314 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 MAGEE2Q8TD90 523 aaPredicted RBP22.57■■□□□ 1.2
U2AF1-206ENST00000464750 SLC41A3Q96GZ6 507 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 ZNF317Q96PQ6 595 aaPredicted RBP22.57■■□□□ 1.2
U2AF1-206ENST00000464750 SLC38A2Q96QD8 506 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 TMEM43Q9BTV4 400 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 ASPNQ9BXN1 380 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 REG4Q9BYZ8 158 aa22.57■■□□□ 1.2
U2AF1-206ENST00000464750 ARPC4-TTLL3A0A0A6YYG9 625 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 LOC102725191A0A1B0GVB3 256 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 FBP2O00757 339 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 SSX4O60224 188 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 NUDT6P53370 316 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 NPTX1Q15818 432 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 TRMT5Q32P41 509 aaKnown RBP22.56■■□□□ 1.2
U2AF1-206ENST00000464750 ZNF613Q6PF04 617 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 PATL1Q86TB9 770 aaKnown RBP22.56■■□□□ 1.2
U2AF1-206ENST00000464750 GPR137CQ8N3F9 429 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 SCAIQ8N9R8 606 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 OR6T1Q8NGN1 323 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 MOGAT1Q96PD6 335 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 OR2M2Q96R28 347 aa22.56■■□□□ 1.2
U2AF1-206ENST00000464750 ARFGEF3Q5TH69 2177 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 INAFM1C9JVW0 142 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 RPL36A-HNRNPH2H7BZ11 118 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 HPRP00739 348 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 C8BP07358 591 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 TROVE2P10155 538 aaKnown RBP eCLIP22.55■■□□□ 1.2
U2AF1-206ENST00000464750 ARF1P84077 181 aaKnown RBP22.55■■□□□ 1.2
U2AF1-206ENST00000464750 PPP2R2BQ00005 443 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 KRTAP1-1Q07627 177 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 TMEM123Q8N131 208 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 C10orf53Q8N6V4 93 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 PIK3C3Q8NEB9 887 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 ANKK1Q8NFD2 765 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 VANGL1Q8TAA9 524 aaPredicted RBP22.55■■□□□ 1.2
U2AF1-206ENST00000464750 TAMM41Q96BW9 452 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 KCNS3Q9BQ31 491 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 GPR35Q9HC97 309 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 ABCA1O95477 2261 aa22.55■■□□□ 1.2
U2AF1-206ENST00000464750 CPSF4LA6NMK7 179 aaKnown RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 LRRN3E7EW58 273 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 MS4A18H0YCH9 400 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 CHP2O43745 196 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 HLA-DOBP13765 273 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 CD247P20963 164 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 PAX7P23759 505 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 APOBEC3AP31941 199 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 POU3F1Q03052 451 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 CEACAM16Q2WEN9 425 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 MS4A18Q3C1V0 323 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 INTS11Q5TA45 600 aaKnown RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 HTRA1Q92743 480 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 KATNB1Q9BVA0 655 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 CRLF2Q9HC73 371 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 FGFR1OP2Q9NVK5 253 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 MRPL39Q9NYK5 338 aaKnown RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 CRNNQ9UBG3 495 aaPredicted RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 ABCA2Q9BZC7 2435 aa22.54■■□□□ 1.2
U2AF1-206ENST00000464750 ANK3Q12955 4377 aaKnown RBP22.54■■□□□ 1.2
U2AF1-206ENST00000464750 H7C417 338 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 GZMMP51124 257 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 PUDPQ08623 228 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 SF3A3Q12874 501 aaKnown RBP eCLIP22.53■■□□□ 1.2
U2AF1-206ENST00000464750 PMS2P3Q13401 168 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 VMACQ2NL98 169 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 ENTPD8Q5MY95 495 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 CARD17Q5XLA6 110 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 RBM45Q8IUH3 476 aaKnown RBP22.53■■□□□ 1.2
U2AF1-206ENST00000464750 OR4D11Q8NGI4 311 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 SLC26A7Q8TE54 656 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 JMJD1CQ15652 2540 aa22.53■■□□□ 1.2
U2AF1-206ENST00000464750 M0R3G1 203 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 CRYAAP02489 173 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 CECR9P0C854 216 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 HOXB1P14653 301 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-206ENST00000464750 ARFIP2P53365 341 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 CHRNB3Q05901 458 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 CYLC2Q14093 348 aaPredicted RBP22.52■■□□□ 1.2
U2AF1-206ENST00000464750 RAB35Q15286 201 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 RABL3Q5HYI8 236 aa22.52■■□□□ 1.2
U2AF1-206ENST00000464750 NANOGP8Q6NSW7 305 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms