RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 TSPY26PQ9H489 355 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 ALG9Q9H6U8 611 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 TMEM185BQ9H7F4 350 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 CAB39LQ9H9S4 337 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 C3orf14Q9HBI5 128 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 NMRAL1Q9HBL8 299 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 Q9N2J8 555 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 PFDN4Q9NQP4 134 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 MED17Q9NVC6 651 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 MED29Q9NX70 200 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 KLHL9Q9P2J3 617 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 FBXO9Q9UK97 447 aaPredicted RBP4.95□□□□□ -1.62
NUP188-202ENST00000464729 GRIP1Q9Y3R0 1128 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 TEX264Q9Y6I9 313 aa4.95□□□□□ -1.62
NUP188-202ENST00000464729 A0A087WV62 115 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 A0A1W2PR80 420 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 TTC36A6NLP5 189 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 CCT8L1PA6NM43 557 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 SYCE1LA8MT33 242 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 SUPT3HB4E1H0 165 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 UBXN8O00124 270 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 GTPBP1O00178 669 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 DNALI1O14645 258 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 SUPT3HO75486 399 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 RAD51DO75771 328 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 BCL10O95999 233 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 DAOP14920 347 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 COX5AP20674 150 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 EDNRAP25101 427 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 ARRB2P32121 409 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 SFTPDP35247 375 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 RFX3P48380 749 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 KHKP50053 298 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 IDH3GP51553 393 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 ZNF41P51814 821 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 ALDH18A1P54886 795 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 RAB10P61026 200 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 RPL15P61313 204 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 SNRPD2P62316 118 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 RASGEF1BQ0VAM2 473 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 GTF2H2Q13888 395 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 GABRA6Q16445 453 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 PFKFB4Q16877 469 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 PLPPR5Q32ZL2 321 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 GRAMD1BQ3KR37 738 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 FBXW9Q5XUX1 488 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 TTC19Q6DKK2 380 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 GTF2H2CQ6P1K8 395 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 METTL2BQ6P1Q9 378 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 FAHD2BQ6P2I3 314 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 SHQ1Q6PI26 577 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 SLC46A3Q7Z3Q1 461 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 ZNF786Q8N393 782 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 OR7G2Q8NG99 324 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 OR4C3Q8NH37 302 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 GRK7Q8WTQ7 553 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 WDR60Q8WVS4 1066 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 ZNF75CPQ92670 426 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 TMEM186Q96B77 213 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 FAHD2AQ96GK7 314 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 PSD2Q9BQI7 771 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 SUCNR1Q9BXA5 334 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 NOL11Q9H8H0 719 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 DDX28Q9NUL7 540 aaKnown RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 GIMAP4Q9NUV9 329 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 HIF1ANQ9NWT6 349 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 NMRK1Q9NWW6 199 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 NFU1Q9UMS0 254 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 C19orf53Q9UNZ5 99 aaPredicted RBP4.94□□□□□ -1.62
NUP188-202ENST00000464729 CHMP2BQ9UQN3 213 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 PCNX3Q9H6A9 2034 aa4.94□□□□□ -1.62
NUP188-202ENST00000464729 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 EXPH5Q8NEV8 1989 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 PIP5K1BO14986 540 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 CYTIPO60759 359 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 ERCC1P07992 297 aaPredicted RBP4.93□□□□□ -1.62
NUP188-202ENST00000464729 NGFRP08138 427 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 ALDOCP09972 364 aaKnown RBP4.93□□□□□ -1.62
NUP188-202ENST00000464729 LINGO3P0C6S8 592 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 T-ENOLP0DO92 83 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 DDX5P17844 614 aaKnown RBP4.93□□□□□ -1.62
NUP188-202ENST00000464729 PGCP20142 388 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 IVDP26440 423 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 ELK4P28324 431 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 SHC1P29353 583 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 GABRA3P34903 492 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 GP5P40197 560 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 SLC18A2Q05940 514 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 GALNT1Q10472 559 aaPredicted RBP4.93□□□□□ -1.62
NUP188-202ENST00000464729 DLG1Q12959 904 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 IFT88Q13099 833 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 HEPACAMQ14CZ8 416 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 PPP1R7Q15435 360 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 ZNHIT3Q15649 155 aaPredicted RBP4.93□□□□□ -1.62
NUP188-202ENST00000464729 ZKSCAN8Q15776 578 aaPredicted RBP4.93□□□□□ -1.62
NUP188-202ENST00000464729 SGO1Q5FBB7 561 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 COMMD6Q7Z4G1 85 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 GOLGA7Q7Z5G4 137 aa4.93□□□□□ -1.62
NUP188-202ENST00000464729 TMEM139Q8IV31 216 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms