RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ALKBH3Q96Q83 286 aaPredicted RBP14.24□□□□□ -0.13
COL1A1-202ENST00000463440 HOPXQ9BPY8 73 aaPredicted RBP14.24□□□□□ -0.13
COL1A1-202ENST00000463440 GSX2Q9BZM3 304 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 SLC19A3Q9BZV2 496 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 OBP2BQ9NPH6 170 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 CMTM6Q9NX76 183 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 LAMP3Q9UQV4 416 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 NOX1Q9Y5S8 564 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 CADP27708 2225 aa14.24□□□□□ -0.13
COL1A1-202ENST00000463440 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 M0R1B8 84 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 TRAF3IP2O43734 574 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 LYPD3O95274 346 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 THY1P04216 161 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 CD40P25942 277 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 PTH2RP49190 550 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 CDH11P55287 796 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 SH3BGRP55822 239 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 TAS2R41P59536 307 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 RPS4XP62701 263 aaKnown RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 ROR2Q01974 943 aaKnown RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 CYBRD1Q53TN4 286 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 Q5PR19 223 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 PRSS57Q6UWY2 283 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 WDR88Q6ZMY6 472 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 DEF8Q6ZN54 512 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 TREML1Q86YW5 311 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 SLC15A3Q8IY34 581 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 DEPDC4Q8N2C3 294 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 PIK3C3Q8NEB9 887 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 ANKK1Q8NFD2 765 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 OR1K1Q8NGR3 316 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 OR5J2Q8NH18 312 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 SMAP2Q8WU79 429 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 CMTM5Q96DZ9 223 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 C1QTNF6Q9BXI9 259 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 POLR2J2Q9GZM3 115 aaKnown RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 POLR2J3Q9H1A7 115 aaKnown RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 FAIMQ9NVQ4 179 aa14.23□□□□□ -0.13
COL1A1-202ENST00000463440 CISD1Q9NZ45 108 aaKnown RBP14.23□□□□□ -0.13
COL1A1-202ENST00000463440 GMNCA6NCL1 334 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 LRRN3E7EW58 273 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 RPL36A-HNRNPH2H7BZ11 118 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 PLPP3O14495 311 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 NDUFAB1O14561 156 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 OR6A2O95222 327 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 HPRP00739 348 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 PAX1P15863 534 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 TNFRSF1BP20333 461 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 AHCYP23526 432 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 PAX7P23759 505 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 LSP1P33241 339 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 POU3F1Q03052 451 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-202ENST00000463440 LIPEQ05469 1076 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 TBRG1Q3YBR2 411 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 HIKESHIQ53FT3 197 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 ANKRD16Q6P6B7 361 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 SLC22A25Q6T423 547 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 HACD2Q6Y1H2 254 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 PXKQ7Z7A4 578 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 TSPYL5Q86VY4 417 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-202ENST00000463440 KRTAP1-3Q8IUG1 177 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 LZICQ8WZA0 190 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 TPD52L3Q96J77 140 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 OR2M2Q96R28 347 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 FKRPQ9H9S5 495 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 NANSQ9NR45 359 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 POU2F3Q9UKI9 436 aa14.22□□□□□ -0.13
COL1A1-202ENST00000463440 KPNA4O00629 521 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 GSTA4O15217 222 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 SNX3O60493 162 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 OR5F1O95221 314 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 CH25HO95992 272 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 HIST1H2ABP04908 130 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 SOD3P08294 240 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 DANCRP0C864 163 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ADORA3P0DMS8 318 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 HLA-DOBP13765 273 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 HOXB1P14653 301 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 FOSL1P15407 271 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 DRD4P21917 467 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 OR1E2P47887 323 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 NUDT2P50583 147 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 SLC7A2P52569 658 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 UBE2NP61088 152 aaKnown RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 SELENOWP63302 87 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 SLC25A3Q00325 362 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ZNF74Q16587 644 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 HIST3H2AQ7L7L0 130 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 LINGO2Q7L985 606 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 YTHDF3Q7Z739 585 aaKnown RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 TMEM123Q8N131 208 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 MAGEE2Q8TD90 523 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 BCL2L2Q92843 193 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-202ENST00000463440 HIST1H2ACQ93077 130 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ZNF426Q9BUY5 554 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 MYLK2Q9H1R3 596 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 ALG2Q9H553 416 aa14.21□□□□□ -0.13
COL1A1-202ENST00000463440 GPR35Q9HC97 309 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms