RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 DUX4L3P0CJ86 424 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DUX4L5P0CJ88 424 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DUX4L6P0CJ89 424 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DUX4L7P0CJ90 424 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 RBMY1A1P0DJD3 496 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 NPIPA8P0DM63 369 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 POLR2EP19388 210 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 TGFBR1P36897 503 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 GPM6AP51674 278 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 ERCC8Q13216 396 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 TRIP10Q15642 601 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 ZBED5Q49AG3 693 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 VAX1Q5SQQ9 334 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DUX4L9Q6RFH8 374 aaPredicted RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 AFTPHQ6ULP2 937 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DPY19L4Q7Z388 723 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 LGI3Q8N145 548 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 VN1R2Q8NFZ6 395 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 OR4D9Q8NGE8 314 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 ATP6V1E2Q96A05 226 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 C14orf79Q96F83 325 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 CMTM7Q96FZ5 175 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 NARS2Q96I59 477 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 WFIKKN1Q96NZ8 548 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 NXF5Q9H1B4 397 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 GPATCH2LQ9NWQ4 482 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 XCL2Q9UBD3 114 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 DUX4Q9UBX2 424 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 NPIPA1Q9UND3 350 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 B9D1Q9UPM9 204 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 NUDCQ9Y266 331 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 RASD1Q9Y272 281 aa0.67□□□□□ -2.3
PTPN22-203ENST00000460620 RPL36Q9Y3U8 105 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 GPATCH8Q9UKJ3 1502 aaKnown RBP0.67□□□□□ -2.3
PTPN22-203ENST00000460620 ZNF407Q9C0G0 2248 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 FOXE1O00358 373 aaPredicted RBP0.66□□□□□ -2.3
PTPN22-203ENST00000460620 BCAS1O75363 584 aaPredicted RBP0.66□□□□□ -2.3
PTPN22-203ENST00000460620 C1GALT1C1LP0DN25 315 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 PRPS2P11908 318 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 CYB561P49447 251 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 ZNF616Q08AN1 781 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 IL15RAQ13261 267 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 FZD2Q14332 565 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 GAMTQ14353 236 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 FAM71F2Q6NXP2 309 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 UNQ9165/PRO28630Q6UXU0 137 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 HSDL2Q6YN16 418 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 LINC00336Q6ZUF6 198 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 ANKRD23Q86SG2 305 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 SNX32Q86XE0 403 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 GRAMD2AQ8IUY3 354 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 DENND6BQ8NEG7 585 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 TSSK3Q96PN8 268 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 MRPL45Q9BRJ2 306 aaKnown RBP0.66□□□□□ -2.3
PTPN22-203ENST00000460620 ACTR6Q9GZN1 396 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 LHX5Q9H2C1 402 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 ACTR8Q9H981 624 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 C12orf10Q9HB07 376 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 VAT1LQ9HCJ6 419 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.66□□□□□ -2.3
PTPN22-203ENST00000460620 SEC14L3Q9UDX4 400 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 GSTK1Q9Y2Q3 226 aa0.66□□□□□ -2.3
PTPN22-203ENST00000460620 WDR62O43379 1518 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 CCDC182A6NF36 153 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 SDHDO14521 159 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 CTAGE5O15320 804 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 CCNE2O96020 404 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 IGHG4P01861 327 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 TNFSF9P41273 254 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 TDO2P48775 406 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 PRRX1P54821 245 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 PKNOX1P55347 436 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 HSF2Q03933 536 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 CBX3Q13185 183 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 PIGHQ14442 188 aaPredicted RBP0.65□□□□□ -2.3
PTPN22-203ENST00000460620 LDLRAP1Q5SW96 308 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 HES5Q5TA89 166 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 SASS6Q6UVJ0 657 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 ZNF546Q86UE3 836 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 MISPQ8IVT2 679 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 ZNF664Q8N3J9 261 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 SPC24Q8NBT2 197 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 CATSPER1Q8NEC5 780 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 SLC13A3Q8WWT9 602 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 FGF14Q92915 247 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 ATP6V0BQ99437 205 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 RNF167Q9H6Y7 350 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 SIGLEC8Q9NYZ4 499 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 ATXN10Q9UBB4 475 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 IL19Q9UHD0 177 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 SIGLEC9Q9Y336 463 aa0.65□□□□□ -2.3
PTPN22-203ENST00000460620 AK6Q9Y3D8 172 aaKnown RBP0.65□□□□□ -2.3
PTPN22-203ENST00000460620 J3QRE1 110 aa0.65□□□□□ -2.31
PTPN22-203ENST00000460620 DDX39AO00148 427 aaKnown RBP0.65□□□□□ -2.31
PTPN22-203ENST00000460620 KERAO60938 352 aa0.65□□□□□ -2.31
PTPN22-203ENST00000460620 LRATO95237 230 aa0.65□□□□□ -2.31
PTPN22-203ENST00000460620 MT-ATP6P00846 226 aa0.65□□□□□ -2.31
PTPN22-203ENST00000460620 HPCAL1P37235 193 aa0.65□□□□□ -2.31
PTPN22-203ENST00000460620 CRISP1P54107 249 aa0.65□□□□□ -2.31
PTPN22-203ENST00000460620 SLC7A9P82251 487 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms