RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TIGD3Q6B0B8 471 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 WBP2NLQ6ICG8 309 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 NIPAL3Q6P499 406 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 GDPGP1Q6ZNW5 385 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 BCDIN3DQ7Z5W3 292 aaKnown RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF440Q8IYI8 595 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF555Q8NEP9 628 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 OR4K5Q8NGD3 323 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 C9orf43Q8TAL5 461 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 GNPDA2Q8TDQ7 276 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 DNAJA4Q8WW22 397 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 PPP1R14BQ96C90 147 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SGCZQ96LD1 299 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 BBC3Q96PG8 261 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 APOL4Q9BPW4 351 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ADNPQ9H2P0 1102 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 EGLN3Q9H6Z9 239 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ATP13A2Q9NQ11 1180 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 TRAPPC13A5PLN9 417 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 OR5H15A6NDH6 313 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF503-AS2A6NEH8 195 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 AQP7P3A6NL99 342 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CYTIPO60759 359 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 TNFSF13O75888 250 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 OR7A10O76100 309 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PGA4P0DJD7 388 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PGA3P0DJD8 388 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 OTX1P32242 354 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 SH3BGRP55822 239 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 TUBA1BP68363 451 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 STX4Q12846 297 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 FOXF1Q12946 379 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 GNA13Q14344 377 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ULK3Q6PHR2 472 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 TUBA1AQ71U36 451 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PRR22Q8IZ63 422 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 CYP4Z2PQ8N1L4 340 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 LRRC17Q8N6Y2 441 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SCAIQ8N9R8 606 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ZNF248Q8NDW4 579 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 OR10S1Q8NGN2 331 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 OR8J1Q8NGP2 316 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 MFSD8Q8NHS3 518 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 ASB10Q8WXI3 467 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 MR1Q95460 341 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 SLC25A46Q96AG3 418 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 PPP1R3EQ9H7J1 279 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 GP6Q9HCN6 339 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 Q9N2J8 555 aa4.42□□□□□ -1.7
RIF1-207ENST00000454583 C19orf25Q9UFG5 118 aaPredicted RBP4.42□□□□□ -1.7
RIF1-207ENST00000454583 YLPM1P49750 1951 aaKnown RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 ZNF891A8MT65 544 aaPredicted RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 DVL2O14641 736 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 WNT11O96014 354 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 IFNA14P01570 189 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 SERPIND1P05546 499 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 CD53P19397 219 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 CD40LGP29965 261 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 RFX2P48378 723 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 RUNX1T1Q06455 604 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 C17orf67Q0P5P2 114 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 IKZF1Q13422 519 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 TP53BP2Q13625 1128 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 SLC17A1Q14916 467 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 SPINK14Q6IE38 97 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 ZNF529Q6P280 563 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 PTCHD4Q6ZW05 846 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 GRINAQ7Z429 371 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 LYSMD2Q8IV50 215 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 CROCCP3Q8IVE0 287 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 ZNF614Q8N883 585 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 OR52N1Q8NH53 320 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 RBM18Q96H35 190 aaKnown RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 TPD52L3Q96J77 140 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 MAP6Q96JE9 813 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 ARL5BQ96KC2 179 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 ADOQ96SZ5 270 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 LPAR4Q99677 370 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 FKRPQ9H9S5 495 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 PLGRKTQ9HBL7 147 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 CTPS2Q9NRF8 586 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 NSG1A0A0A6YYJ2 146 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 A0A0B4J293 547 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 EFCAB10A6NFE3 127 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 DCTN6O00399 190 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 OGG1O15527 345 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 PRODHO43272 600 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 CEACAM8P31997 349 aaPredicted RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 APOBEC1P41238 236 aaKnown RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 SLC6A8P48029 635 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 SSR4P51571 173 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 ST3GAL4Q11206 333 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 SWI5Q1ZZU3 235 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 TEX30Q5JUR7 227 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 LIAT1Q6ZQX7 453 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 RPS19BP1Q86WX3 136 aaKnown RBP4.41□□□□□ -1.7
RIF1-207ENST00000454583 PLCZ1Q86YW0 608 aa4.41□□□□□ -1.7
RIF1-207ENST00000454583 TMEM251Q8N6I4 163 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms