RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 LYPD8Q6UX82 237 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 ZNF550Q7Z398 422 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 OR6T1Q8NGN1 323 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 PHOSPHO1Q8TCT1 267 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 KCNE4Q8WWG9 221 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 THAP4Q8WY91 577 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 THOC3Q96J01 351 aaKnown RBP14.43□□□□□ -0.1
SNX17-204ENST00000453453 JAM3Q9BX67 310 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 RSPO3Q9BXY4 272 aaPredicted RBP14.43□□□□□ -0.1
SNX17-204ENST00000453453 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNX17-204ENST00000453453 TEKT2Q9UIF3 430 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 CHST2Q9Y4C5 530 aa14.43□□□□□ -0.1
SNX17-204ENST00000453453 A0A1W2PQD3 144 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 C7orf66A4D0T2 115 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 FRS3O43559 492 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 UBL4AP11441 157 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 EVI2BP34910 448 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 ADH7P40394 386 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 ETV1P50549 477 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 RNF144AP50876 292 aaPredicted RBP14.42□□□□□ -0.1
SNX17-204ENST00000453453 FBXW4P57775 412 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 MLF1P58340 268 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 TAS2R41P59536 307 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 RPS25P62851 125 aaKnown RBP14.42□□□□□ -0.1
SNX17-204ENST00000453453 Q0VFX4 171 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 COL28A1Q2UY09 1125 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 CRTC2Q53ET0 693 aaPredicted RBP14.42□□□□□ -0.1
SNX17-204ENST00000453453 PLEKHM3Q6ZWE6 761 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 SLC51BQ86UW2 128 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 COMTD1Q86VU5 262 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 RBM45Q8IUH3 476 aaKnown RBP14.42□□□□□ -0.1
SNX17-204ENST00000453453 ARMC10Q8N2F6 343 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 TMEM156Q8N614 296 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 OR4D11Q8NGI4 311 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 OR5M3Q8NGP4 307 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 KCTD12Q96CX2 325 aaKnown RBP14.42□□□□□ -0.1
SNX17-204ENST00000453453 SPACA9Q96E40 222 aaPredicted RBP14.42□□□□□ -0.1
SNX17-204ENST00000453453 PRRC1Q96M27 445 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 CITED4Q96RK1 184 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 ATF6BQ99941 703 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 ARHGAP9Q9BRR9 750 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 BEX2Q9BXY8 128 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 FLRT3Q9NZU0 649 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 MSRB2Q9Y3D2 182 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 HSPB11Q9Y547 144 aa14.42□□□□□ -0.1
SNX17-204ENST00000453453 TUBAL3A6NHL2 446 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 ZNF891A8MT65 544 aaPredicted RBP14.41□□□□□ -0.1
SNX17-204ENST00000453453 KDM4EB2RXH2 506 aaPredicted RBP14.41□□□□□ -0.1
SNX17-204ENST00000453453 HLA-DPB1P04440 258 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 SPINK2P20155 84 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 ITGA3P26006 1051 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 APEX1P27695 318 aaKnown RBP14.41□□□□□ -0.1
SNX17-204ENST00000453453 NTRK2Q16620 822 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 H3F3CQ6NXT2 135 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 MISPQ8IVT2 679 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 ZNF248Q8NDW4 579 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 BRIX1Q8TDN6 353 aaKnown RBP14.41□□□□□ -0.1
SNX17-204ENST00000453453 TM9SF4Q92544 642 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 CNOT9Q92600 299 aaKnown RBP14.41□□□□□ -0.1
SNX17-204ENST00000453453 UPRTQ96BW1 309 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 C1GALT1C1Q96EU7 318 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 MCHR1Q99705 422 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 ZNF559Q9BR84 538 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 FNDC11Q9BVV2 318 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 MCUBQ9NWR8 336 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 DNAJB12Q9NXW2 375 aaKnown RBP14.41□□□□□ -0.1
SNX17-204ENST00000453453 ABI3Q9P2A4 366 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 ALG1L2C9J202 215 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 MASP2O00187 686 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 CASKO14936 926 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 FMO6PO60774 539 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 SLC22A5O76082 557 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 GIPRP48546 466 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 TGM4P49221 684 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 PER3P56645 1201 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 BDH1Q02338 343 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 BAMBIQ13145 260 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 FCRLBQ6BAA4 426 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 C1orf94Q6P1W5 598 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 PAMR1Q6UXH9 720 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 UTS2BQ765I0 119 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 SIRT6Q8N6T7 355 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 LSMEM1Q8N8F7 131 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 GATSQ8NAP1 163 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 POGLUT1Q8NBL1 392 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 SLC37A3Q8NCC5 494 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 ZNF485Q8NCK3 441 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 PCSK5Q92824 1860 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 HGDQ93099 445 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 OTULINQ96BN8 352 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 RADILQ96JH8 1075 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 TVP23BQ9NYZ1 205 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 NLKQ9UBE8 527 aa14.41□□□□□ -0.1
SNX17-204ENST00000453453 BET1O15155 118 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 ZNF264O43296 627 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 AKAP8O43823 692 aaKnown RBP14.4□□□□□ -0.1
SNX17-204ENST00000453453 FADS1O60427 444 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 ZNF354AO60765 605 aaPredicted RBP14.4□□□□□ -0.1
SNX17-204ENST00000453453 SNAPC5O75971 98 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 DHFRP00374 187 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms