RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ARHGDIAP52565 204 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 POU3F1Q03052 451 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 TFF3Q07654 80 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 CCNIQ14094 377 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 LAPTM4AQ15012 233 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 SP5Q6BEB4 398 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 NIPAL3Q6P499 406 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 ZNF474Q6S9Z5 364 aaPredicted RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 TFAP2EQ6VUC0 442 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 MEX3DQ86XN8 651 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 EPHX4Q8IUS5 362 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 ANKK1Q8NFD2 765 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 SLCO4A1Q96BD0 722 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 DUS3LQ96G46 650 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 FAM46AQ96IP4 442 aaKnown RBP12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 NDEL1Q9GZM8 345 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 DNAJB9Q9UBS3 223 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 U3KQV3 271 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 DOCK7Q96N67 2140 aa12.95□□□□□ -0.34
NCKIPSD-207ENST00000453349 POLEQ07864 2286 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 A0A1W2PRG6 482 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 OR6C65A6NJZ3 312 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 ZNF726A6NNF4 738 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 CLOCKO15516 846 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 SERPINI2O75830 405 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 KRT33AO76009 404 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 CNOT4O95628 575 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 HPRP00739 348 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 HLA-DOBP13765 273 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 NTF4P34130 210 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 CD79BP40259 229 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 PEX19P40855 299 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 AQP2P41181 271 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 LIMS1P48059 325 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 PRPS1P60891 318 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 ACTR3P61158 418 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 RPL18Q07020 188 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 PPP1R8Q12972 351 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 KPNB1Q14974 876 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 MICAQ29983 383 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 ZBED5Q49AG3 693 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 FBXW9Q5XUX1 488 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 OR51A7Q8NH64 312 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 TNFRSF13CQ96RJ3 184 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 HDHD5Q9BXW7 423 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 INIPQ9NRY2 104 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 GALNT8Q9NY28 637 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 PLEKHB1Q9UF11 243 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 PRSS50Q9UI38 385 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 HIF3AQ9Y2N7 669 aa12.94□□□□□ -0.34
NCKIPSD-207ENST00000453349 UBR5O95071 2799 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 UNC119BA6NIH7 251 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 SLC43A1O75387 559 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 DEAF1O75398 565 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 E2F6O75461 281 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 TIPRLO75663 272 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 BCL10O95999 233 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 ADAP00813 363 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 F13BP05160 661 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 GRNP28799 593 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 DNAJA1P31689 397 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 PCYT1AP49585 367 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 ALG10Q5BKT4 473 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 C1orf94Q6P1W5 598 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 Q6ZT83 130 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 SLC35D2Q76EJ3 337 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 ABHD12BQ7Z5M8 362 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 ZER1Q7Z7L7 766 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 MED12LQ86YW9 2145 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 POMGNT2Q8NAT1 580 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 OR4C15Q8NGM1 316 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 MOSPD2Q8NHP6 518 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 TXNDC15Q96J42 360 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 ADAD1Q96M93 576 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 SLCO5A1Q9H2Y9 848 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 ASB6Q9NWX5 421 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 RCE1Q9Y256 329 aa12.93□□□□□ -0.34
NCKIPSD-207ENST00000453349 TRAV27A0A087WT01 109 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 C16orf97H3BN30 126 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 C19orf84I3L1E1 186 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 PTP4A3O75365 173 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 IGHV3-9P01782 118 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 FCGR1AP12314 374 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 IFNGR1P15260 489 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 FASP25445 335 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 RPL4P36578 427 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 SELENOPP49908 381 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 BIDP55957 195 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 FAPQ12884 760 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 P2RY6Q15077 328 aa12.92□□□□□ -0.34
NCKIPSD-207ENST00000453349 OR13C2Q8NGS9 318 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms