RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZNF346Q9UL40 294 aaKnown RBP3.64□□□□□ -1.83
LINC00393-202ENST00000452852 OR10H1Q9Y4A9 318 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 WIPI2Q9Y4P8 454 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 RNF215Q9Y6U7 377 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 COL12A1Q99715 3063 aa3.64□□□□□ -1.83
LINC00393-202ENST00000452852 A0A0J9YVX5 310 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 A0A1W2PNU3 283 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 XKRY2A2RUG3 117 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 FAM172BPA6NC97 362 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 LRRC30A6NM36 301 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PPIAL4DF5H284 164 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 H3BTX0 84 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PSMD11O00231 422 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 CASC3O15234 703 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 DUX1O43812 170 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 KHDRBS3O75525 346 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 GAS8-AS1O95177 125 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 IGHEP01854 428 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PRSS1P07477 247 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 SLC35G4P0C7Q5 338 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 GZMAP12544 262 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 CCNB1P14635 433 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PCMT1P22061 227 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 CALB2P22676 271 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PCK1P35558 622 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ACTR1BP42025 376 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 SSR1P43307 286 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 RGRP47804 291 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 HCAR3P49019 387 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 CDH6P55285 790 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ABCE1P61221 599 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 MAXP61244 160 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 RPS27AP62979 156 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ZFP36L1Q07352 338 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 SLC10A7Q0GE19 358 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PIGHQ14442 188 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 TGIF1Q15583 401 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 FAM189A2Q15884 450 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 DPYSL2Q16555 572 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 HADHQ16836 314 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 CCDC122Q5T0U0 273 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ARMC12Q5T9G4 340 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 MARC1Q5VT66 337 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 C1orf189Q5VU69 101 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 DMKNQ6E0U4 476 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 DOK6Q6PKX4 331 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 GSG1LQ6UXU4 331 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF562Q6V9R5 426 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 NPWQ8N729 165 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 GVQW1Q8N7I0 195 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ICA1LQ8NDH6 482 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 OR5T2Q8NGG2 359 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 OR10G6Q8NH81 332 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 KIAA1143Q96AT1 154 aaPredicted RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ECHDC3Q96DC8 303 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PEBP4Q96S96 227 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PINK1Q9BXM7 581 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 PITPNM3Q9BZ71 974 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 HAUS4Q9H6D7 363 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ELOVL3Q9HB03 270 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 RDH14Q9HBH5 336 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 LPAR2Q9HBW0 351 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 RAB18Q9NP72 206 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 FAM114A2Q9NRY5 505 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 NMRK1Q9NWW6 199 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 RNF14Q9UBS8 474 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 GHRLQ9UBU3 117 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 KLK11Q9UBX7 282 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 AP4B1Q9Y6B7 739 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 BZW2Q9Y6E2 419 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 SDK2Q58EX2 2172 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 GCN1Q92616 2671 aaKnown RBP3.63□□□□□ -1.83
LINC00393-202ENST00000452852 ATRXP46100 2492 aa3.63□□□□□ -1.83
LINC00393-202ENST00000452852 IGHV5-10-1A0A0J9YXX1 117 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CTAGE15A4D2H0 777 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 METTL21EPA6NDL7 271 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 TRAFD1O14545 582 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 INPP4BO15327 924 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF208O43345 1280 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 B4GALT2O60909 372 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ANP32DO95626 131 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 FGF1P05230 155 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 IVLP07476 585 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 UQCRBP14927 111 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CPN1P15169 458 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 SELEP16581 610 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF30P17039 623 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 AK4P27144 223 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 TEAD1P28347 426 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 OPRL1P41146 370 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ETV5P41161 510 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CSRP3P50461 194 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 GUCY2DQ02846 1103 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 MRPL28Q13084 256 aaKnown RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 C16orf72Q14CZ0 275 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 BEND6Q5SZJ8 279 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 TTC23Q5W5X9 447 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 LRRC66Q68CR7 880 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 FAM53AQ6NSI3 398 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 SYT10Q6XYQ8 523 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms