RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SEMA4CQ9C0C4 833 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 EGFL7Q9UHF1 273 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 LAMA4Q16363 1823 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 A0A1W2PR80 420 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 PEX11BO96011 259 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 QDPRP09417 244 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 PET100P0DJ07 73 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 CRABP1P29762 137 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 HSF1Q00613 529 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MAPK11Q15759 364 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 LETMD1Q6P1Q0 360 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMPRSS11AQ6ZMR5 421 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MSANTD1Q6ZTZ1 278 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 UBE2DNLQ8IWF7 75 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM222BQ8WU58 562 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ST8SIA1Q92185 356 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 B3GAT1Q9P2W7 334 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 HS3ST3B1Q9Y662 390 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 IGLV3-16A0A075B6K0 115 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 IGHV3-15A0A0B4J1V0 119 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SAC3D1A6NKF1 404 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM233B4DJY2 109 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 FBP2O00757 339 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ANGPTL7O43827 346 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 KDM4BO94953 1096 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 YES1P07947 543 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 OMPP47874 163 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 UFM1P61960 85 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZFP36L1Q07352 338 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 KLF10Q13118 480 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 CEACAM7Q14002 265 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ATAD3CQ5T2N8 411 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 HMGN2P46Q86SG4 172 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 VRK2Q86Y07 508 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SPICQ8N5J4 248 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZNF676Q8N7Q3 588 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 GGHQ92820 318 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 CACNG6Q9BXT2 260 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 PFDN2Q9UHV9 154 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 A3GALT2U3KPV4 340 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 SPTBN4Q9H254 2564 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 A8MVM7 634 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 NTN3O00634 580 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 LMX1BO60663 402 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 VSIG10L2P0DP72 767 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MAP3K8P41279 467 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ARHGAP11BQ3KRB8 267 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 ZBTB37Q5TC79 503 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 KIF2BQ8N4N8 673 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR10G3Q8NGC4 313 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR5W2Q8NH69 310 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 HMGCLL1Q8TB92 370 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 HAS2Q92819 552 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 MRGPRX4Q96LA9 322 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 TCF7L1Q9HCS4 588 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 INIPQ9NRY2 104 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 CHRNA9Q9UGM1 479 aa5.13□□□□□ -1.59
CDC42BPA-209ENST00000448940 GXYLT2A0PJZ3 443 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 FRG2CA6NGY1 282 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 TIMM23O14925 209 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR5F1O95221 314 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 HSMCR30P0CW71 290 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 PRKCAP17252 672 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 CLK1P49759 484 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 SEC24CP53992 1094 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 GFRA1P56159 465 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 EDDM3AQ14507 147 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 LTB4RQ15722 352 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 NDUFAF6Q330K2 333 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 RPL13AP3Q6NVV1 102 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 CARM1Q86X55 608 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 MREGQ8N565 214 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR2M7Q8NG81 312 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR2Z1Q8NG97 314 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 FAM110DQ8TAY7 271 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 C22orf15Q8WYQ4 148 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 PIGCQ92535 297 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 TMEM68Q96MH6 324 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 ATOH8Q96SQ7 321 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 C14orf119Q9NWQ9 140 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 C19orf53Q9UNZ5 99 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 KCNE1BA0A087WTH5 132 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 IGHV3-64DA0A0J9YX35 117 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 CENPBD1B2RD01 187 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 RAB4AP20338 218 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 IVDP26440 423 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 BRS3P32247 399 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 EVI2BP34910 448 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 BMI1P35226 326 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 POU3F4P49335 361 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 PRKXP51817 358 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 SUMO3P55854 103 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 DSCR9P59020 149 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 GLYR1Q49A26 553 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 CLEC12AQ5QGZ9 265 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 IDNKQ5T6J7 187 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR6N2Q8NGY6 317 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 OR2T4Q8NH00 348 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 WBP1Q96G27 269 aa5.12□□□□□ -1.59
CDC42BPA-209ENST00000448940 ERMAPQ96PL5 475 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms