RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ALG10BQ5I7T1 473 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 SFRP5Q5T4F7 317 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 SSX8Q7RTT4 187 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 PIWIL3Q7Z3Z3 882 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 AMIGO2Q86SJ2 522 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 MEX3DQ86XN8 651 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 NKAIN4Q8IVV8 208 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 LSMEM1Q8N8F7 131 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 OR52J3Q8NH60 311 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 RNF128Q8TEB7 428 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 LRTOMTQ8WZ04 291 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 ROBO4Q8WZ75 1007 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC41A3Q96GZ6 507 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 PRSS27Q9BQR3 290 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 ESRP2Q9H6T0 727 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 C12orf49Q9H741 205 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 KLHL13Q9P2N7 655 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 RPS6KB2Q9UBS0 482 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 FAM32AQ9Y421 112 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 SONP18583 2426 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-213ENST00000448520 CHD3Q12873 2000 aaKnown RBP12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TMED7-TICAM2A0A0A6YYA0 188 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM72A0PK05 275 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ZC3H12DA2A288 527 aaKnown RBP12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 KIAA1324LA8MWY0 1029 aaPredicted RBP12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 OVOL3O00110 214 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 PIP5K1CO60331 668 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 OR5F1O95221 314 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 CD3EP07766 207 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 YES1P07947 543 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 UQCRBP14927 111 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 RHCEP18577 417 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC1A3P43003 542 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TNK1Q13470 666 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 LAPTM4AQ15012 233 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM176BQ3YBM2 270 aaPredicted RBP12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 SLC25A53Q5H9E4 307 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 NCMAPQ5T1S8 102 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ZNF613Q6PF04 617 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TFAP2EQ6VUC0 442 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 FCRLAQ7L513 359 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ATG4DQ86TL0 474 aaPredicted RBP12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ADGRG3Q86Y34 549 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TUSC5Q8IXB3 177 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 OFCC1Q8IZS5 231 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 PIK3C3Q8NEB9 887 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ABHD3Q8WU67 409 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM234Q8WY98 164 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ST8SIA1Q92185 356 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 PKP2Q99959 881 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 OR11A1Q9GZK7 315 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ADAM19Q9H013 955 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 EVA1AQ9H8M9 152 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 NMNAT1Q9HAN9 279 aaPredicted RBP12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 ARMC1Q9NVT9 282 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 TMED7Q9Y3B3 224 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 U3KQV3 271 aa12.16□□□□□ -0.46
PDLIM2-213ENST00000448520 IGKV1D-42A0A075B6H8 117 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 TRBV4-1A0A0J9YWV2 114 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 H0YHG0 523 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 CST1P01037 141 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 H1F0P07305 194 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 ITGA2P17301 1181 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 POLR2HP52434 150 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 RAC3P60763 192 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 ITGADQ13349 1161 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 SEC23BQ15437 767 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 FGD3Q5JSP0 725 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 OR2T5Q6IEZ7 315 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 ULK3Q6PHR2 472 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 TBPL2Q6SJ96 375 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 NUFIP2Q7Z417 695 aaKnown RBP12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 CYP4Z1Q86W10 505 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 OR2T29Q8NH02 315 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 SPATA3Q8NHX4 192 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 STMN2Q93045 179 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 KISS1RQ969F8 398 aaPredicted RBP12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 FBXW5Q969U6 566 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 MRGPRX4Q96LA9 322 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 DHRS1Q96LJ7 313 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 MDFIQ99750 246 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 SEMA6AQ9H2E6 1030 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 NTN4Q9HB63 628 aa12.15□□□□□ -0.46
PDLIM2-213ENST00000448520 ELOA3DA6NLF2 546 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ETV2O00321 342 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 KPNA4O00629 521 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 CHP2O43745 196 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 CRLF1O75462 422 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 GADD45GO95257 159 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 BAG2O95816 211 aa12.14□□□□□ -0.47
PDLIM2-213ENST00000448520 ADAP00813 363 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms