RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 KCNE3Q9Y6H6 103 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 CENPFP49454 3210 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 BRWD3Q6RI45 1802 aa8.65□□□□□ -1.03
SYNPO2-204ENST00000448416 KDM4FA0A1W2PPD8 638 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 NPIPB9F8W1W9 429 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 RNASEK-C17orf49H0YIS7 233 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PAPLNO95428 1278 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PPP1R3DO95685 299 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 THY1P04216 161 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 HMGN2P05204 90 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 RHOP08100 348 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 NME1P15531 152 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 CD52P31358 61 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 EPHB3P54753 998 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 POU4F2Q12837 409 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 UNQ9370/PRO34162Q6UXP9 181 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 NDUFAF7Q7L592 441 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF280BQ86YH2 543 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 RNF113BQ8IZP6 322 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 SDR9C7Q8NEX9 313 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 OR4C6Q8NH72 309 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PHYHIPQ92561 330 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 WBP2Q969T9 261 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 S100PBPQ96BU1 408 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 TMEM100Q9NV29 134 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PPP4R1LQ9P1A2 415 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 DNAH12Q6ZR08 3092 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A0A6YYC8 382 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 I3L1I5 382 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 COCHO43405 550 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 KCNAB3O43448 404 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 AQP2P41181 271 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ACTR1BP42025 376 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 RBM34P42696 430 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 TAS2R60P59551 318 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 STEAP1BQ6NZ63 245 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 LPCAT3Q6P1A2 487 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF467Q7Z7K2 595 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 DCAF4L2Q8NA75 395 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 WFDC5Q8TCV5 224 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 EDAQ92838 391 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ISOC2Q96AB3 205 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ZMYND19Q96E35 227 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PIK3IP1Q96FE7 263 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 SLC35A3Q9Y2D2 325 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 CPED1A4D0V7 1026 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 HOXC4P09017 264 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ITGA3P26006 1051 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 NAA10P41227 235 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 GLP1RP43220 463 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 NCBP2P52298 156 aaKnown RBP eCLIP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 FXYD6P3P58550 94 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ACTA2P62736 377 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ACTG2P63267 376 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 LTBQ06643 244 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 FNDC3BQ53EP0 1204 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 C11orf96Q7Z7L8 435 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 C2orf73Q8N5S3 287 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 OR4E2Q8NGC2 313 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 OR1J2Q8NGS2 313 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PLD4Q96BZ4 506 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 C16orf58Q96GQ5 468 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 ADAM2Q99965 735 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 NCDNQ9UBB6 729 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 PADI3Q9ULW8 664 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 SLC27A6Q9Y2P4 619 aa8.64□□□□□ -1.03
SYNPO2-204ENST00000448416 SLC38A8A6NNN8 435 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 PPIHO43447 177 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 XRCC3O43542 346 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 TBX19O60806 448 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 RCBTB2O95199 551 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 CD74P04233 296 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 PGAM2P15259 253 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 FRKP42685 505 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 CLINT1Q14677 625 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 AGERQ15109 404 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 LIPNQ5VXI9 398 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 MRM1Q6IN84 353 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 LCTLQ6UWM7 567 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 DND1Q8IYX4 353 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 ARRDC1Q8N5I2 433 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 CPNE4Q96A23 557 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 RAB7BQ96AH8 199 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 NECAB3Q96P71 396 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 OCSTAMPQ9BR26 566 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 ZDHHC5Q9C0B5 715 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 SELENOIQ9C0D9 397 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 C1orf198Q9H425 327 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 SUV39H2Q9H5I1 410 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 WSB2Q9NYS7 404 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 CDV3Q9UKY7 258 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 OR51B4Q9Y5P0 310 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 ETV7Q9Y603 341 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A0B4J2A0 478 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A1B0GTI1 187 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 hCG_1809904A0A1W2PP81 198 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A1W2PR64 198 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 A0A1W2PRV1 198 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 URADA6NGE7 173 aa8.63□□□□□ -1.03
SYNPO2-204ENST00000448416 ZNF208O43345 1280 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms