RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 B3GAT2Q9NPZ5 323 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZGLP1P0C6A0 271 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF28P17035 718 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 RPL35P42766 123 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 GDI2P50395 445 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 POLR2HP52434 150 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 PSMA6P60900 246 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZXDAP98168 799 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ACSM3Q53FZ2 586 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 P4HA3Q7Z4N8 544 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF227Q86WZ6 799 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 POGLUT1Q8NBL1 392 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR1L3Q8NH93 324 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 S100A16Q96FQ6 103 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 CCDC74BQ96LY2 380 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARL6Q9H0F7 186 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 FSCN3Q9NQT6 498 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 C2orf42Q9NWW7 574 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 C13orf42A0A1B0GVH6 325 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 NKX2-2O95096 273 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC2A10O95528 541 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 CD63P08962 238 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 LCN1P31025 176 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 E2F1Q01094 437 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 PRKCDQ05655 676 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 CAMK2BQ13554 666 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 PRICKLE4Q2TBC4 344 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF782Q6ZMW2 699 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 TSEN54Q7Z6J9 526 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 NAXEQ8NCW5 288 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 MED11Q9P086 117 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 LRRN3E7EW58 273 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 SCG5P05408 212 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 BAK1Q16611 211 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 TMEM176BQ3YBM2 270 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 PAQR6Q6TCH4 344 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF615Q8N8J6 731 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR5AK2Q8NH90 309 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ALG12Q9BV10 488 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 DHDHQ9UQ10 334 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC6A5Q9Y345 797 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 C5orf51A6NDU8 294 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 DPM1O60762 260 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 CSO75390 466 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR7A10O76100 309 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 CCNOP22674 350 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 EPHA8P29322 1005 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 AVPR2P30518 371 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 MPLP40238 635 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 EMDP50402 254 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF84P51523 738 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 CHAF1BQ13112 559 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ELP2Q6IA86 826 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 KIRREL2Q6UWL6 708 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 MISPQ8IVT2 679 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 NLGN4YQ8NFZ3 816 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 FN3KQ9H479 309 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 FBXO9Q9UK97 447 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 PLEKHA6Q9Y2H5 1048 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 A6NIZ1 184 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 CENPBD1B2RD01 187 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 PHYHO14832 338 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ICOSLGO75144 302 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 IL33O95760 270 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 MAS1P04201 325 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 SEMG1P04279 462 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ERP29P30040 261 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 RBM34P42696 430 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 DAP3P51398 398 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 HMGA2P52926 109 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 RAP1BP61224 184 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 RAP1AP62834 184 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 DUSP2Q05923 314 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 RASD2Q96D21 266 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 GALNT9Q9HCQ5 603 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 INPP5EQ9NRR6 644 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ADAM18Q9Y3Q7 739 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 GRIP1Q9Y3R0 1128 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 TRAV36DV7A0A075B6V5 113 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 TMEM72A0PK05 275 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 MEIS3P1A6NDR6 274 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 RGS13O14921 159 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC19A2O60779 497 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 FARS2O95363 451 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 SYNGR4O95473 234 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 HCKP08631 526 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ANXA3P12429 323 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 DPY19L2P2Q6ZN68 376 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 GLCCI1Q86VQ1 547 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 SCN2AQ99250 2005 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 SYT4Q9H2B2 425 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 CDCP1Q9H5V8 836 aa10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-202ENST00000438773 GPX5O75715 221 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARHGDIBP52566 201 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 SRYQ05066 204 aa10.59□□□□□ -0.71
TRAPPC9-202ENST00000438773 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms