RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 GABREP78334 506 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ILKQ13418 452 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 IKZF1Q13422 519 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 RBMS2Q15434 407 aaKnown RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 BEST4Q8NFU0 473 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ANKRD9Q96BM1 317 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 MYOGP15173 224 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ITGB8P26012 769 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 EMX1Q04741 257 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 COL9A2Q14055 689 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ABHD17CQ6PCB6 329 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ZBTB8AQ96BR9 441 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 COQ10AQ96MF6 247 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 UBE2ZQ9H832 354 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 TAF1LQ8IZX4 1826 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 ELAVL4P26378 380 aaKnown RBP14.67□□□□□ -0.06
PTPN13-204ENST00000436978 DBPQ10586 325 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-204ENST00000436978 C18orf63Q68DL7 685 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 RAB3CQ96E17 227 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 UBBP0CG47 229 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 NR4A2P43354 598 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 RAB11AP62491 216 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 RPS27AP62979 156 aaKnown RBP14.67□□□□□ -0.06
PTPN13-204ENST00000436978 UBA52P62987 128 aaKnown RBP14.67□□□□□ -0.06
PTPN13-204ENST00000436978 GRINAQ7Z429 371 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 KCNG3Q8TAE7 436 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 SLC35A4Q96G79 324 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 SLC22A12Q96S37 553 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 H0YIG0 161 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 FZD7O75084 574 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 ZNF136P52737 540 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 LINC01465Q8N7H1 131 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 OR2T35Q8NGX2 323 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 GOT1L1Q8NHS2 421 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-204ENST00000436978 LKAAEAR1Q8TD35 194 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 ETV5P41161 510 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 TNK1Q13470 666 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 SFRP5Q5T4F7 317 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 GJC3Q8NFK1 279 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 STK17BO94768 372 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 SCG5P05408 212 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 HTR2CP28335 458 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 ACBD4Q8NC06 268 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 CCDC74AQ96AQ1 378 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 NOX3Q9HBY0 568 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 HSBP1L1C9JCN9 74 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 RGS11O94810 467 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 BLOC1S1P78537 153 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 SLC22A24Q8N4F4 322 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 CTRCQ99895 268 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 HAO2Q9NYQ3 351 aa14.67□□□□□ -0.06
PTPN13-204ENST00000436978 CR2P20023 1033 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 GGHQ92820 318 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 FOXN4Q96NZ1 517 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SLC29A1Q99808 456 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 CDCP1Q9H5V8 836 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 OR6C6A6NF89 314 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 HOXA1P49639 335 aaPredicted RBP14.66□□□□□ -0.06
PTPN13-204ENST00000436978 VRK3Q8IV63 474 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SIDT1Q9NXL6 827 aaKnown RBP14.66□□□□□ -0.06
PTPN13-204ENST00000436978 MDFIC2A0A1B0GVS7 189 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 MEIS3P1A6NDR6 274 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SPDEFO95238 335 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 FPR3P25089 353 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 CLDN6P56747 220 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SELPLGQ14242 412 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 PYCR3Q53H96 274 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 FBXW12Q6X9E4 464 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 LINC00696Q6ZRV3 163 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 DMBX1Q8NFW5 382 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SLC23A2Q9UGH3 650 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 PPP6CO00743 305 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 PRAMEF4O60810 478 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SIRPAP78324 504 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 KRBOX4Q5JUW0 171 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 OR2L13Q8N349 312 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 PHYHIPQ92561 330 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 EGLN1Q9GZT9 426 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SCN4AP35499 1836 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 PLRG1O43660 514 aaKnown RBP14.66□□□□□ -0.06
PTPN13-204ENST00000436978 ABHD16AO95870 558 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 MT-ND4P03905 459 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 P2RX1P51575 399 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 RPS23P62266 143 aaKnown RBP14.66□□□□□ -0.06
PTPN13-204ENST00000436978 PLK5Q496M5 336 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 ZNF740Q8NDX6 193 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SLC37A2Q8TED4 501 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 THOC3Q96J01 351 aaKnown RBP14.66□□□□□ -0.06
PTPN13-204ENST00000436978 NDUFAF4Q9P032 175 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 CXADRP78310 365 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 GDF7Q7Z4P5 450 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 C19orf12Q9NSK7 152 aa14.66□□□□□ -0.06
PTPN13-204ENST00000436978 SLC34A2O95436 690 aa14.65□□□□□ -0.06
PTPN13-204ENST00000436978 T-ENOLP0DO92 83 aa14.65□□□□□ -0.06
PTPN13-204ENST00000436978 KITLGP21583 273 aa14.65□□□□□ -0.06
PTPN13-204ENST00000436978 HLA-DMAP28067 261 aa14.65□□□□□ -0.06
PTPN13-204ENST00000436978 TRHRP34981 398 aaPredicted RBP14.65□□□□□ -0.06
PTPN13-204ENST00000436978 CD79BP40259 229 aa14.65□□□□□ -0.06
PTPN13-204ENST00000436978 GIPRP48546 466 aa14.65□□□□□ -0.06
PTPN13-204ENST00000436978 SHHQ15465 462 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms