RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MLLT11Q13015 90 aaPredicted RBP19.07■□□□□ 0.64
PTPRF-207ENST00000436724 LEG1Q6P5S2 330 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 MAMDC2Q7Z304 686 aaPredicted RBP19.07■□□□□ 0.64
PTPRF-207ENST00000436724 MDGA2Q7Z553 956 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 PSD4Q8NDX1 1056 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 TSPAN32Q96QS1 320 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 LRFN3Q9BTN0 628 aa19.07■□□□□ 0.64
PTPRF-207ENST00000436724 SPIN1Q9Y657 262 aaPredicted RBP19.07■□□□□ 0.64
PTPRF-207ENST00000436724 H7C1C5 153 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 AHSA1O95433 338 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 PLGP00747 810 aaPredicted RBP19.06■□□□□ 0.64
PTPRF-207ENST00000436724 AHCYP23526 432 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 MSX1P28360 303 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 APOBEC1P41238 236 aaKnown RBP19.06■□□□□ 0.64
PTPRF-207ENST00000436724 LCN6P62502 163 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 PHC2Q8IXK0 858 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 ACBD7Q8N6N7 88 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 ZFP41Q8N8Y5 198 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 OR10H4Q8NGA5 316 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 POC1BQ8TC44 478 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 STK35Q8TDR2 534 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 ITPKCQ96DU7 683 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 TSSK2Q96PF2 358 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 PROK2Q9HC23 129 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 CPNE5Q9HCH3 593 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 DOCK10Q96BY6 2186 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 IDH3BO43837 385 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 MT-ATP6P00846 226 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 OPN1LWP04000 364 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 SBK2P0C263 348 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 ICAM2P13598 275 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 SDHAP31040 664 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 HCCSP53701 268 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 LYPD4Q6UWN0 246 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 OR5J2Q8NH18 312 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 ISG20L2Q9H9L3 353 aaKnown RBP19.06■□□□□ 0.64
PTPRF-207ENST00000436724 HPF1Q9NWY4 346 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 GRHPRQ9UBQ7 328 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 IL17BQ9UHF5 180 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 UGT2A1Q9Y4X1 527 aa19.06■□□□□ 0.64
PTPRF-207ENST00000436724 FAM171A2A8MVW0 826 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 GPX5O75715 221 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 MESTQ5EB52 335 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ARMC10Q8N2F6 343 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 KDM8Q8N371 416 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 PARP16Q8N5Y8 322 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF417Q8TAU3 575 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 SPRYD4Q8WW59 207 aaPredicted RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF587Q96SQ5 575 aaPredicted RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 TIMP4Q99727 224 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ARHGAP9Q9BRR9 750 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 COL25A1Q9BXS0 654 aaPredicted RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 GPR87Q9BY21 358 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 RACGAP1Q9H0H5 632 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 TMEM185BQ9H7F4 350 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 RPRD1BQ9NQG5 326 aaKnown RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF346Q9UL40 294 aaKnown RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 PCDHGB6Q9Y5F9 930 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ISPDA4D126 451 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 C21orf140B9A014 251 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 FTCDNL1E5RQL4 147 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 TBX1O43435 398 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 SPI1P17947 270 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 C19orf57Q0VDD7 668 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 SGCBQ16585 318 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF181Q2M3W8 571 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 FAM83FQ8NEG4 500 aaPredicted RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 OR4K17Q8NGC6 315 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 PAQR8Q8TEZ7 354 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 TMEM203Q969S6 136 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 TRMT61AQ96FX7 289 aaKnown RBP19.05■□□□□ 0.64
PTPRF-207ENST00000436724 FAM210AQ96ND0 272 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 FRMD6Q96NE9 622 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 NMNAT2Q9BZQ4 307 aa19.05■□□□□ 0.64
PTPRF-207ENST00000436724 STMND1H3BQB6 276 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 ETV2O00321 342 aaPredicted RBP19.04■□□□□ 0.64
PTPRF-207ENST00000436724 RNF13O43567 381 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 APEHP13798 732 aaKnown RBP19.04■□□□□ 0.64
PTPRF-207ENST00000436724 DLX5P56178 289 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 ZNF45Q02386 682 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 CDC20Q12834 499 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 CHAF1BQ13112 559 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 SNTA1Q13424 505 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 STEAP3Q658P3 488 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 JAZF1Q86VZ6 243 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 KLHL36Q8N4N3 616 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 RFLNBQ8N5W9 214 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 FADS6Q8N9I5 356 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 SMPDL3BQ92485 455 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 C1GALT1C1Q96EU7 318 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 GNRHR2Q96P88 292 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 ALG8Q9BVK2 526 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 ASPNQ9BXN1 380 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 TTTY10Q9BZA0 68 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 RERGLQ9H628 205 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 SH2D2AQ9NP31 389 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 INIPQ9NRY2 104 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 NDUFB11Q9NX14 153 aa19.04■□□□□ 0.64
PTPRF-207ENST00000436724 DAPL1A0PJW8 107 aa19.03■□□□□ 0.64
PTPRF-207ENST00000436724 TFPIP10646 304 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms