RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 ANKS4BQ8N8V4 417 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 RNF217Q8TC41 542 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 MAGEE2Q8TD90 523 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF837Q96EG3 531 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 ZNF317Q96PQ6 595 aaPredicted RBP18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 GPR35Q9HC97 309 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 KLHL14Q9P2G3 628 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 FKBP7Q9Y680 259 aa18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 ANK3Q12955 4377 aaKnown RBP18.96■□□□□ 0.63
RPUSD3-206ENST00000433535 TRAV36DV7A0A075B6V5 113 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 TRBV5-3A0A0A0MS03 114 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 ZNF503-AS2A6NEH8 195 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 TRAF3IP2O43734 574 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 IGLV1-44P01699 117 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 OR4A8P0C604 315 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 IGHV4-31P0DP07 118 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 USF1P22415 310 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 IDH3GP51553 393 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 AQP5P55064 265 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 NCALDP61601 193 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 SCARB2Q14108 478 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 CEACAM16Q2WEN9 425 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 PODNL1Q6PEZ8 512 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 KRT73Q86Y46 540 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 SPATA3Q8NHX4 192 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 DNAJA4Q8WW22 397 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 PROX1Q92786 737 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 OR2M2Q96R28 347 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 VRK1Q99986 396 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 WFDC6Q9BQY6 131 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 CCDC28BQ9BUN5 200 aa18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-206ENST00000433535 RPL36A-HNRNPH2H7BZ11 118 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 OR2T1O43869 369 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 EDF1O60869 148 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 HPRP00739 348 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 IFNA2P01563 188 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 IGKV3-15P01624 115 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 PPIBP23284 216 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 PDLIM4P50479 330 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 RGS8P57771 180 aaPredicted RBP18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 GGTLC2Q14390 218 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 CARTPTQ16568 116 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 AGKQ53H12 422 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 C5orf46Q6UWT4 87 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 H1FNTQ75WM6 255 aaPredicted RBP18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 TMEM123Q8N131 208 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 KCNK17Q96T54 332 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 SPATA5L1Q9BVQ7 753 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 CRLF2Q9HC73 371 aa18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 TESQ9UGI8 421 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-206ENST00000433535 RNF212BA8MTL3 300 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 NQO1P15559 274 aaKnown RBP18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 PAX7P23759 505 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 NPRL3Q12980 569 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 C3orf36Q3SXR2 165 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 PHYHD1Q5SRE7 291 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 CARD17Q5XLA6 110 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 CYB5R2Q6BCY4 276 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 ULK3Q6PHR2 472 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 ANKK1Q8NFD2 765 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 PIMREGQ9BSJ6 248 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 TMEM38AQ9H6F2 299 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 GMEB1Q9Y692 573 aa18.93■□□□□ 0.62
RPUSD3-206ENST00000433535 A0A0B4J2E0 115 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 A0A1B0GX12 115 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 VWC2LB2RUY7 222 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 B9A039 149 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 M0R3G1 203 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 AKAP8O43823 692 aaKnown RBP18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 TPST2O60704 377 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 PDE5AO76074 875 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 FAM157CP0CG43 387 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 HLA-DOBP13765 273 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 SLC6A2P23975 617 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 CAPZA2P47755 286 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 LSM11P83369 360 aaKnown RBP eCLIP18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 HGFACQ04756 655 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 OR1Q1Q15612 314 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 EFNB3Q15768 340 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 ADRM1Q16186 407 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 FAM91A1Q658Y4 838 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 MDP1Q86V88 176 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 UEVLDQ8IX04 471 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 FAM169BQ8N8A8 192 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 PIK3C3Q8NEB9 887 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 STON2Q8WXE9 905 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 SLC47A1Q96FL8 570 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 CPPED1Q9BRF8 314 aaPredicted RBP18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 EMC6Q9BV81 110 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 REPIN1Q9BWE0 567 aaKnown RBP18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 SELENONQ9NZV5 590 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 CDC42EP3Q9UKI2 254 aa18.92■□□□□ 0.62
RPUSD3-206ENST00000433535 MALRD1Q5VYJ5 2156 aa18.91■□□□□ 0.62
RPUSD3-206ENST00000433535 A0A087WUJ7 227 aa18.91■□□□□ 0.62
RPUSD3-206ENST00000433535 PRORSD1PA6NEY8 169 aa18.91■□□□□ 0.62
RPUSD3-206ENST00000433535 LRRN3E7EW58 273 aa18.91■□□□□ 0.62
RPUSD3-206ENST00000433535 MS4A18H0YCH9 400 aa18.91■□□□□ 0.62
RPUSD3-206ENST00000433535 BGLAPP02818 100 aa18.91■□□□□ 0.62
RPUSD3-206ENST00000433535 HOXB1P14653 301 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms