RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CPNE4Q96A23 557 aaPredicted RBP9.27□□□□□ -0.93
MDC1-205ENST00000425072 SARAFQ96BY9 339 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
MDC1-205ENST00000425072 TIMP4Q99727 224 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 SF3B5Q9BWJ5 86 aaKnown RBP9.27□□□□□ -0.93
MDC1-205ENST00000425072 PLA2G12AQ9BZM1 189 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 ENKD1Q9H0I2 346 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 TXNIPQ9H3M7 391 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 FN3KQ9H479 309 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 PRORYQ9H606 182 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 TMEM185BQ9H7F4 350 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 BLOC1S6Q9UL45 172 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 TP53TG5Q9Y2B4 290 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 MYRFQ9Y2G1 1151 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 TPRKBQ9Y3C4 175 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 PTPRQQ9UMZ3 2332 aa9.27□□□□□ -0.93
MDC1-205ENST00000425072 FREM2Q5SZK8 3169 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 MAGEA13PA6NCF6 341 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 OR14I1A6ND48 311 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 A6NIZ1 184 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 NPIPB13A6NJU9 1138 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 NPIPB4C9JG80 1138 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 AQP7O14520 342 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 XKRYO14609 159 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 TNFSF11O14788 317 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 SURF4O15260 269 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 TNFAIP8O95379 198 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 SYNGR4O95473 234 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 TXNDC12O95881 172 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 BCL10O95999 233 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 PDGFAP04085 211 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 CCDC159P0C7I6 412 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 ZNF3P17036 446 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 ZNF43P17038 809 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 ACVR2AP27037 513 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 SDHAP31040 664 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 EIF1AXP47813 144 aaKnown RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 LHX2P50458 406 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 DAP3P51398 398 aaKnown RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 CLDN15P56746 228 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 FXYD6P3P58550 94 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 RAP1BP61224 184 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 RAP1AP62834 184 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 CD47Q08722 323 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 MAD2L1BPQ15013 274 aaPredicted RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 RNFT1Q5M7Z0 435 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 FAM205BPQ63HN1 556 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 FAM180AQ6UWF9 173 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 THSD4Q6ZMP0 1018 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 UEVLDQ8IX04 471 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 ENTHD1Q8IYW4 607 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 LRRC75AQ8NAA5 344 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 OR8D4Q8NGM9 314 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 MOSPD2Q8NHP6 518 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 TMEM163Q8TC26 289 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 FBLIM1Q8WUP2 373 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 KATNB1Q9BVA0 655 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 CMC2Q9NRP2 79 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 RASSF1Q9NS23 344 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 PLCXD1Q9NUJ7 323 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 ZNF226Q9NYT6 803 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 UBAP1Q9NZ09 502 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 IL20RAQ9UHF4 553 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 ZNF346Q9UL40 294 aaKnown RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 MCTS1Q9ULC4 181 aaKnown RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 RNF6Q9Y252 685 aa9.26□□□□□ -0.93
MDC1-205ENST00000425072 RPL36Q9Y3U8 105 aaKnown RBP9.26□□□□□ -0.93
MDC1-205ENST00000425072 ZNF407Q9C0G0 2248 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 IGSF10Q6WRI0 2623 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 GTF3C1Q12789 2109 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 A0A1W2PNV4 684 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 IRGMA1A4Y4 181 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 AQP7P3A6NL99 342 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 ZNF726A6NNF4 738 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 AHRRA9YTQ3 701 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 MCIDASD6RGH6 385 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 PRR23D1E9PI22 279 aaPredicted RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 NPIPA5E9PKD4 350 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 C11orf98E9PRG8 122 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 K7EM74 188 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 PPP1R3DO95685 299 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 RENP00797 406 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 F13BP05160 661 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 CELA3AP09093 270 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 FAM87AP0C7U9 286 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 PRR23D2P0DMB1 279 aaPredicted RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 ZNF708P17019 499 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 SHC1P29353 583 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 SUCLG1P53597 346 aaKnown RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 CLDN18P56856 261 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 CLDN20P56880 219 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 RPL27P61353 136 aaKnown RBP9.25□□□□□ -0.93
MDC1-205ENST00000425072 ERVK-25P63136 954 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 LGALS3BPQ08380 585 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 ITGADQ13349 1161 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 TMED1Q13445 227 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 KLHL22Q53GT1 634 aa9.25□□□□□ -0.93
MDC1-205ENST00000425072 SLC35F1Q5T1Q4 408 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms