RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TMPRSS11FQ6ZWK6 438 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 AAED1Q7RTV5 226 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 CXorf67Q86X51 503 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-205ENST00000423941 ZDHHC21Q8IVQ6 265 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 AQP12AQ8IXF9 295 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 C10orf53Q8N6V4 93 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 LINC01560Q8TB33 94 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 BPIFA2Q96DR5 249 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 BOD1Q96IK1 185 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 WFIKKN1Q96NZ8 548 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 LINC00470Q9BZP3 86 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 MMADHCQ9H3L0 296 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-205ENST00000423941 SLC7A10Q9NS82 523 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 C6orf203Q9P0P8 240 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-205ENST00000423941 POMPQ9Y244 141 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 TESMINQ9Y4I5 508 aa16.3■□□□□ 0.2
HDAC6-205ENST00000423941 PIP5K1CO60331 668 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 DIRAS1O95057 198 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 ADAP00813 363 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 FABP3P05413 133 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 PRF1P14222 555 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 NQO1P15559 274 aaKnown RBP16.29■□□□□ 0.2
HDAC6-205ENST00000423941 IGHV1-2P23083 117 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 LIMS1P48059 325 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 RPS4XP62701 263 aaKnown RBP16.29■□□□□ 0.2
HDAC6-205ENST00000423941 PODNL1Q6PEZ8 512 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 CASP12Q6UXS9 341 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 ASRGL1Q7L266 308 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.29■□□□□ 0.2
HDAC6-205ENST00000423941 NRMQ8IXM6 262 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 ZNF433Q8N7K0 673 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-205ENST00000423941 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 CCDC124Q96CT7 223 aaKnown RBP16.29■□□□□ 0.2
HDAC6-205ENST00000423941 ZNF347Q96SE7 839 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 USB1Q9BQ65 265 aaKnown RBP16.29■□□□□ 0.2
HDAC6-205ENST00000423941 LRMDAQ9H2I8 198 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 SLCO5A1Q9H2Y9 848 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 NDRG3Q9UGV2 375 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 SLC7A8Q9UHI5 535 aa16.29■□□□□ 0.2
HDAC6-205ENST00000423941 CACNA1DQ01668 2161 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 TRBV4-1A0A0J9YWV2 114 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 SH3D21A4FU49 640 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 OR6C65A6NJZ3 312 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 ADORA3P0DMS8 318 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 PPP3CBP16298 524 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 MAKP20794 623 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 SELENOPP49908 381 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 CLDN17P56750 224 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 SMIM11AP58511 58 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 ANKDD1AQ495B1 522 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 WDFY1Q8IWB7 410 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 UEVLDQ8IX04 471 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 TMEM123Q8N131 208 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 POMGNT2Q8NAT1 580 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 STEAP2Q8NFT2 490 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 SEPHS2Q99611 448 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 ASB6Q9NWX5 421 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 HIF3AQ9Y2N7 669 aa16.28■□□□□ 0.2
HDAC6-205ENST00000423941 APCP25054 2843 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 TCRBV3S1A0A5B6 114 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 SH3PXD2BA1X283 911 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 GOSR1O95249 250 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 HIST1H2ABP04908 130 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 THBDP07204 575 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 UMPSP11172 480 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 IFI30P13284 250 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 FOXG1P55316 489 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-205ENST00000423941 CBX1P83916 185 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 C1DQ13901 141 aaKnown RBP16.27■□□□□ 0.2
HDAC6-205ENST00000423941 SEC23BQ15437 767 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 ZNF730Q6ZMV8 503 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 HIST3H2AQ7L7L0 130 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 ADGRG5Q8IZF4 528 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 ANKK1Q8NFD2 765 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 HIST1H2ACQ93077 130 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 TXNDC15Q96J42 360 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 LRR1Q96L50 414 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 MUS81Q96NY9 551 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 OR2M2Q96R28 347 aa16.27■□□□□ 0.2
HDAC6-205ENST00000423941 ITPR2Q14571 2701 aa16.27■□□□□ 0.19
HDAC6-205ENST00000423941 PRR14LQ5THK1 2151 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 NPIPB13A6NJU9 1138 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 NPIPB4C9JG80 1138 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 RPL36A-HNRNPH2H7BZ11 118 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 CDC42EP2O14613 210 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 KLF4O43474 513 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 GADD45GO95257 159 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 IGHV3-9P01782 118 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 ITGA5P08648 1049 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 HOXB6P17509 224 aaKnown RBP16.26■□□□□ 0.19
HDAC6-205ENST00000423941 SSTR2P30874 369 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 OMPP47874 163 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 SLC9A3P48764 834 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 POU3F1Q03052 451 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-205ENST00000423941 CHRNB3Q05901 458 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 RPL18Q07020 188 aaKnown RBP16.26■□□□□ 0.19
HDAC6-205ENST00000423941 FAPQ12884 760 aa16.26■□□□□ 0.19
HDAC6-205ENST00000423941 FOXD4Q12950 439 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-205ENST00000423941 FAM98BQ52LJ0 330 aaKnown RBP16.26■□□□□ 0.19
HDAC6-205ENST00000423941 NIPAL3Q6P499 406 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms