RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF321PQ8N8H1 164 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 OR10G3Q8NGC4 313 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 ACER1Q8TDN7 264 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 SPRYD4Q8WW59 207 aaPredicted RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 PELI1Q96FA3 418 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 AMDHD1Q96NU7 426 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 RBM14Q96PK6 669 aaKnown RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 HIST1H4GQ99525 98 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 TMEM43Q9BTV4 400 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 SELENOIQ9C0D9 397 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 SUDS3Q9H7L9 328 aaPredicted RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 PLGRKTQ9HBL7 147 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 RAB20Q9NX57 234 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 PCSK1NQ9UHG2 260 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 KIAA1257Q9ULG3 409 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 MAD1L1Q9Y6D9 718 aa2.53□□□□□ -2
HMGB1P49-201ENST00000418882 DDX49Q9Y6V7 483 aaKnown RBP2.53□□□□□ -2
HMGB1P49-201ENST00000418882 TET2Q6N021 2002 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 A0A1W2PNV4 684 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 TAPBPO15533 448 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 FCMRO60667 390 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 DNAJB6O75190 326 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 CIB2O75838 187 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC25A27O95847 323 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 IGHG4P01861 327 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 LGALS2P05162 132 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 VDAC2P45880 294 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 SEC61GP60059 68 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 REG3AQ06141 175 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ARHGAP19Q14CB8 494 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 RCN1Q15293 331 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 HADHQ16836 314 aaKnown RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 C10orf120Q5SQS8 335 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ARMC12Q5T9G4 340 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR52W1Q6IF63 320 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 BLOC1S2Q6QNY1 142 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ANGPTL8Q6UXH0 198 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 SLC38A6Q8IZM9 456 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 FTMTQ8N4E7 242 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR4K14Q8NGD5 310 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR52K1Q8NGK4 314 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 STARD8Q92502 1023 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 MRPS31Q92665 395 aaKnown RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF707Q96C28 371 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 RASD2Q96D21 266 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 COQ2Q96H96 371 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 FAM210BQ96KR6 192 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 FCRL1Q96LA6 429 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 GSDMAQ96QA5 445 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 P2RY13Q9BPV8 354 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 NIPSNAP3BQ9BS92 247 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 HDHD3Q9BSH5 251 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 NAT9Q9BTE0 207 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ROPN1BQ9BZX4 212 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 RNF167Q9H6Y7 350 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 FOLH1BQ9HBA9 442 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 POPDC2Q9HBU9 364 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZFP14Q9HCL3 533 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 NUDT15Q9NV35 164 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 NECAP2Q9NVZ3 263 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 RNF14Q9UBS8 474 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 PISDQ9UG56 409 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 TBX21Q9UL17 535 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR10H1Q9Y4A9 318 aa2.52□□□□□ -2.01
HMGB1P49-201ENST00000418882 ASTN1O14525 1302 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 SH3TC1Q8TE82 1336 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 TRAV26-1A0A087WT03 109 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 A0A0G2JN53 185 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIR2DL5BA0A0G2JN68 375 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIR2DL5BA0A0G2JPC4 375 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 BTN3A3O00478 584 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 CASC3O15234 703 aaKnown RBP2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 NBR2O15453 112 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 LRATO95237 230 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 PAHP00439 452 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 PNMTP11086 282 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 NCF2P19878 526 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 TUBG1P23258 451 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 LAP3P28838 519 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIR2DS4P43632 304 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 EFNB2P52799 333 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 DLX1P56177 255 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 EIF3EP60228 445 aaKnown RBP2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 LIPEQ05469 1076 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 ENPEPQ07075 957 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 DMTNQ08495 405 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 C1orf61Q13536 156 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 GGTLC2Q14390 218 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 DPYSL2Q16555 572 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 RSPO1Q2MKA7 263 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 ALKBH6Q3KRA9 238 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 KDM7AQ6ZMT4 941 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 LINC01551Q86U37 167 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 BIVMQ86UB2 503 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 ZNF683Q8IZ20 524 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 KIR2DL5AQ8N109 375 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR9K2Q8NGE7 335 aa2.51□□□□□ -2.01
HMGB1P49-201ENST00000418882 OR1F12Q8NHA8 337 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms