RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 IFNA8P32881 189 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 RPS4XP62701 263 aaKnown RBP16.46■□□□□ 0.23
PTCD3-204ENST00000418628 TRAP1Q12931 704 aaKnown RBP16.46■□□□□ 0.23
PTCD3-204ENST00000418628 DAZAP2Q15038 168 aaPredicted RBP16.46■□□□□ 0.23
PTCD3-204ENST00000418628 SFRP5Q5T4F7 317 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 PXKQ7Z7A4 578 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 CYP4Z1Q86W10 505 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 ZNF100Q8IYN0 542 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 RNF113BQ8IZP6 322 aaKnown RBP16.46■□□□□ 0.23
PTCD3-204ENST00000418628 TMEM123Q8N131 208 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 CCDC124Q96CT7 223 aaKnown RBP16.46■□□□□ 0.23
PTCD3-204ENST00000418628 PIP5K1AQ99755 562 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 CADM1Q9BY67 442 aaKnown RBP16.46■□□□□ 0.23
PTCD3-204ENST00000418628 MAGIXQ9H6Y5 334 aa16.46■□□□□ 0.23
PTCD3-204ENST00000418628 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ATP5HO75947 161 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 GOSR1O95249 250 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ADAP00813 363 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 H1F0P07305 194 aaKnown RBP16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ITGA5P08648 1049 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 HLA-DOBP13765 273 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ZNF43P17038 809 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ITGA2P17301 1181 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 SELENOPP49908 381 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 PRKCDQ05655 676 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ITGADQ13349 1161 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 PMS2P3Q13401 168 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 FHL1Q13642 323 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 TSPO2Q5TGU0 170 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 SEZ6L2Q6UXD5 910 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 MBOAT2Q6ZWT7 520 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 AAED1Q7RTV5 226 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 WDFY1Q8IWB7 410 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 NRMQ8IXM6 262 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 ZNF433Q8N7K0 673 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-204ENST00000418628 POP5Q969H6 163 aaKnown RBP16.45■□□□□ 0.22
PTCD3-204ENST00000418628 SGTBQ96EQ0 304 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 WFIKKN1Q96NZ8 548 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 SLCO5A1Q9H2Y9 848 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 SLC7A10Q9NS82 523 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 C6orf203Q9P0P8 240 aaPredicted RBP16.45■□□□□ 0.22
PTCD3-204ENST00000418628 NOX1Q9Y5S8 564 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 DSCAMO60469 2012 aa16.45■□□□□ 0.22
PTCD3-204ENST00000418628 GSC2O15499 205 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 DIRAS1O95057 198 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 FABP3P05413 133 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 THBDP07204 575 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 NQO1P15559 274 aaKnown RBP16.44■□□□□ 0.22
PTCD3-204ENST00000418628 PPP3CBP16298 524 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 SSTR2P30874 369 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 FOXG1P55316 489 aaPredicted RBP16.44■□□□□ 0.22
PTCD3-204ENST00000418628 CLDN17P56750 224 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 POU3F1Q03052 451 aaPredicted RBP16.44■□□□□ 0.22
PTCD3-204ENST00000418628 UEVLDQ8IX04 471 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 C10orf53Q8N6V4 93 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 POMGNT2Q8NAT1 580 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 BPIFA2Q96DR5 249 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 BOD1Q96IK1 185 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 OR2M2Q96R28 347 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 HDHD5Q9BXW7 423 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 LINC00470Q9BZP3 86 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 LRMDAQ9H2I8 198 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 HIF3AQ9Y2N7 669 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 CSMD2Q7Z408 3487 aa16.44■□□□□ 0.22
PTCD3-204ENST00000418628 TRBV4-1A0A0J9YWV2 114 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 OR6C65A6NJZ3 312 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 A6NNC1 897 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 SIAH2O43255 324 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 IGHV3-9P01782 118 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 ADORA3P0DMS8 318 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 IFI30P13284 250 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 FUT1P19526 365 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 MAKP20794 623 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 CRYGSP22914 178 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 LIMS1P48059 325 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 RPL18Q07020 188 aaKnown RBP16.43■□□□□ 0.22
PTCD3-204ENST00000418628 SEC23BQ15437 767 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 PODNL1Q6PEZ8 512 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 TBPL2Q6SJ96 375 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 TMPRSS11FQ6ZWK6 438 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 LINGO2Q7L985 606 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 NANOGNBQ7Z5D8 188 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 ZDHHC21Q8IVQ6 265 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 ANKK1Q8NFD2 765 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 STEAP2Q8NFT2 490 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 KISS1RQ969F8 398 aaPredicted RBP16.43■□□□□ 0.22
PTCD3-204ENST00000418628 ACTR6Q9GZN1 396 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 MCCC2Q9HCC0 563 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 ASB6Q9NWX5 421 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 TAS2R16Q9NYV7 291 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 SLC7A8Q9UHI5 535 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 FAM32AQ9Y421 112 aaKnown RBP16.43■□□□□ 0.22
PTCD3-204ENST00000418628 TEX15Q9BXT5 2789 aa16.43■□□□□ 0.22
PTCD3-204ENST00000418628 CSMD1Q96PZ7 3565 aa16.42■□□□□ 0.22
PTCD3-204ENST00000418628 NPIPB13A6NJU9 1138 aa16.42■□□□□ 0.22
PTCD3-204ENST00000418628 AQP12BA6NM10 295 aa16.42■□□□□ 0.22
PTCD3-204ENST00000418628 NPIPB4C9JG80 1138 aa16.42■□□□□ 0.22
PTCD3-204ENST00000418628 RPL36A-HNRNPH2H7BZ11 118 aa16.42■□□□□ 0.22
PTCD3-204ENST00000418628 AKAP8O43823 692 aaKnown RBP16.42■□□□□ 0.22
PTCD3-204ENST00000418628 CTAG2O75638 210 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms