RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CDCA4Q9BXL8 241 aa18.69■□□□□ 0.58
CASC3-203ENST00000418132 OR2B2Q9GZK3 357 aa18.69■□□□□ 0.58
CASC3-203ENST00000418132 MED20Q9H944 212 aa18.69■□□□□ 0.58
CASC3-203ENST00000418132 ACOT13Q9NPJ3 140 aa18.69■□□□□ 0.58
CASC3-203ENST00000418132 KCNMB2Q9Y691 235 aa18.69■□□□□ 0.58
CASC3-203ENST00000418132 OR6A2O95222 327 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 PAICSP22234 425 aaKnown RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 GTF2E2P29084 291 aaKnown RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 C19orf57Q0VDD7 668 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 ZP4Q12836 540 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 IRF3Q14653 427 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TOMM20Q15388 145 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TMEM176BQ3YBM2 270 aaPredicted RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 KLHL22Q53GT1 634 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 IGFL2Q6UWQ7 119 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 SLC16A12Q6ZSM3 486 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 CYB561A3Q8NBI2 242 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 NPEPL1Q8NDH3 523 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 FAM83FQ8NEG4 500 aaPredicted RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 SDR9C7Q8NEX9 313 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 OTULINQ96BN8 352 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 RASD2Q96D21 266 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 LGALS12Q96DT0 336 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 OR5B2Q96R09 309 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 INIPQ9NRY2 104 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 SSUH2Q9Y2M2 353 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TEX13CA0A0J9YWL9 993 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 C11orf98E9PRG8 122 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 M0R3G1 203 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 CEACAM4O75871 244 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 OPN1LWP04000 364 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 ADRA2AP08913 450 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 SFTPDP35247 375 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 ARG2P78540 354 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 RAB40BQ12829 278 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TBCEQ15813 527 aaPredicted RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 SYT6Q5T7P8 510 aaPredicted RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 GPR139Q6DWJ6 353 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 MEPCEQ7L2J0 689 aaKnown RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 ANKRD13BQ86YJ7 626 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 FAM98AQ8NCA5 519 aaKnown RBP18.68■□□□□ 0.58
CASC3-203ENST00000418132 OR14L1PQ8NHC6 308 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 SLC39A7Q92504 469 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 RNFT2Q96EX2 444 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TMEM80Q96HE8 168 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TSPAN32Q96QS1 320 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 CHST11Q9NPF2 352 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 TRAPPC4Q9Y296 219 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 B3GALT5Q9Y2C3 310 aa18.68■□□□□ 0.58
CASC3-203ENST00000418132 FREM3P0C091 2139 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 CEP295Q9C0D2 2601 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 MED12Q93074 2177 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 A0A1W2PNR3 127 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 IRGMA1A4Y4 181 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 MS4A18H0YCH9 400 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 RNF13O43567 381 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 CD46P15529 392 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 ZNF182P17025 639 aaPredicted RBP18.67■□□□□ 0.58
CASC3-203ENST00000418132 SLC2A5P22732 501 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 NR4A1P22736 598 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 GDF1P27539 372 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 RAC1P63000 192 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 PUDPQ08623 228 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 MS4A18Q3C1V0 323 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 GALNTL5Q7Z4T8 443 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 YRDCQ86U90 279 aaKnown RBP18.67■□□□□ 0.58
CASC3-203ENST00000418132 LSM14AQ8ND56 463 aaKnown RBP18.67■□□□□ 0.58
CASC3-203ENST00000418132 MIB2Q96AX9 1013 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 ZNF703Q9H7S9 590 aaPredicted RBP18.67■□□□□ 0.58
CASC3-203ENST00000418132 FGF20Q9NP95 211 aaPredicted RBP18.67■□□□□ 0.58
CASC3-203ENST00000418132 FANCFQ9NPI8 374 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 GRHPRQ9UBQ7 328 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 ENPP5Q9UJA9 477 aa18.67■□□□□ 0.58
CASC3-203ENST00000418132 AHCYP23526 432 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 TMED1Q13445 227 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 ADPRHL1Q8NDY3 354 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 OR52I1Q8NGK6 324 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 C9orf43Q8TAL5 461 aaPredicted RBP18.66■□□□□ 0.58
CASC3-203ENST00000418132 SCMH1Q96GD3 660 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 C5orf34Q96MH7 638 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 NMNAT3Q96T66 252 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 B4GALT7Q9UBV7 327 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 ZNF346Q9UL40 294 aaKnown RBP18.66■□□□□ 0.58
CASC3-203ENST00000418132 DIMT1Q9UNQ2 313 aaKnown RBP18.66■□□□□ 0.58
CASC3-203ENST00000418132 KLRC4-KLRK1H3BQV0 150 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 IGHMP01871 453 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 CDKN2AP42771 156 aaKnown RBP18.66■□□□□ 0.58
CASC3-203ENST00000418132 TLE3Q04726 772 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 RNLSQ5VYX0 342 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 TMPPEQ6ZT21 453 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 KISS1RQ969F8 398 aaPredicted RBP18.66■□□□□ 0.58
CASC3-203ENST00000418132 NMNAT2Q9BZQ4 307 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.66■□□□□ 0.58
CASC3-203ENST00000418132 TXNIPQ9H3M7 391 aa18.66■□□□□ 0.58
CASC3-203ENST00000418132 SPTBN4Q9H254 2564 aa18.65■□□□□ 0.58
CASC3-203ENST00000418132 SLC22A31A6NKX4 558 aa18.65■□□□□ 0.58
CASC3-203ENST00000418132 AKR7A3O95154 331 aa18.65■□□□□ 0.58
CASC3-203ENST00000418132 PMS2P2O95744 297 aa18.65■□□□□ 0.58
CASC3-203ENST00000418132 PSMB9P28065 219 aa18.65■□□□□ 0.58
CASC3-203ENST00000418132 DIO1P49895 249 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms