RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 XKRYO14609 159 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 CDC42EP2O14613 210 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 DVL2O14641 736 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 EI24O14681 340 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 LRRTM2O43300 516 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MRPL33O75394 65 aaKnown RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 SMNDC1O75940 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 C1QL1O75973 258 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 AQP8O94778 261 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 TGM6O95932 706 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 BCL10O95999 233 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 STSP08842 583 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 ASAH2BP0C7U1 165 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 UQCRFS1P47985 274 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 GSSP48637 474 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 ALDH3A2P51648 485 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 RPS6KA3P51812 740 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 CLDN17P56750 224 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 LTBQ06643 244 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 DAG1Q14118 895 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 CLEC12AQ5QGZ9 265 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 RIPPLY2Q5TAB7 128 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 LPCAT4Q643R3 524 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 NIPAL3Q6P499 406 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 RASSF6Q6ZTQ3 369 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 AAED1Q7RTV5 226 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 JAZF1Q86VZ6 243 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 CHERPQ8IWX8 916 aaKnown RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 UBE2J2Q8N2K1 259 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 GALNT4Q8N4A0 578 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 CBR4Q8N4T8 237 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 C9orf106Q8NAJ2 232 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 OR9K2Q8NGE7 335 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MOSPD2Q8NHP6 518 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MBD3L2Q8NHZ7 208 aaPredicted RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF775Q96BV0 537 aaPredicted RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 LRRC46Q96FV0 321 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF570Q96NI8 536 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 TNFRSF13CQ96RJ3 184 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 NIPSNAP1Q9BPW8 284 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 PSD2Q9BQI7 771 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 TTYH2Q9BSA4 534 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 EGLN3Q9H6Z9 239 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 SMURF2Q9HAU4 748 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 NTN4Q9HB63 628 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 B3GAT2Q9NPZ5 323 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 C8orf4Q9NR00 106 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 PARPBPQ9NWS1 579 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 GRHPRQ9UBQ7 328 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 UPB1Q9UBR1 384 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 IL20RAQ9UHF4 553 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 PROCRQ9UNN8 238 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 HIF3AQ9Y2N7 669 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MEMO1Q9Y316 297 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 FAM215AQ9Y5M1 114 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 MAGED1Q9Y5V3 778 aaPredicted RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 BOD1L1Q8NFC6 3051 aa7.55□□□□□ -1.2
TRIM48-201ENST00000417545 PHF3Q92576 2039 aaKnown RBP7.55□□□□□ -1.2
TRIM48-201ENST00000417545 A0A1W2PNV4 684 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 EEF1E1-BLOC1S5C9J1V9 151 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 EEF1E1O43324 174 aaKnown RBP7.54□□□□□ -1.2
TRIM48-201ENST00000417545 MGRN1O60291 552 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SS18L1O75177 396 aaPredicted RBP7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SLC43A1O75387 559 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 PPP1R3DO95685 299 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 HPRP00739 348 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 YES1P07947 543 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 GLI4P10075 376 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 NR2C1P13056 603 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 OSMP13725 252 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 CTSSP25774 331 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 PEX2P28328 305 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 OPRM1P35372 400 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 TIMP3P35625 211 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 BIDP55957 195 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 CLRN1P58418 232 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 ZP4Q12836 540 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 RIPK1Q13546 671 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 MELKQ14680 651 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 PDK3Q15120 406 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 RFX4Q33E94 735 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SLC36A3Q495N2 470 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 C4orf17Q53FE4 359 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 CARD17Q5XLA6 110 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 KLHL17Q6TDP4 642 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF620Q6ZNG0 422 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SLC35D2Q76EJ3 337 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 FAM214BQ7L5A3 538 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 PXKQ7Z7A4 578 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 TUSC5Q8IXB3 177 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 GPR137CQ8N3F9 429 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF555Q8NEP9 628 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 OR6N1Q8NGY5 312 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 ASB5Q8WWX0 329 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 LIPHQ8WWY8 451 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
TRIM48-201ENST00000417545 ERMAPQ96PL5 475 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms