RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TRAF3IP2O43734 574 aaPredicted RBP12.99□□□□□ -0.33
LIMS4-201ENST00000413601 MT-ATP6P00846 226 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 HOXC12P31275 282 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 NKX6-1P78426 367 aaPredicted RBP12.99□□□□□ -0.33
LIMS4-201ENST00000413601 SLC25A3Q00325 362 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 HIKESHIQ53FT3 197 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 HACD2Q6Y1H2 254 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 UEVLDQ8IX04 471 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 CMTM5Q96DZ9 223 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 ZNF426Q9BUY5 554 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 LINC00470Q9BZP3 86 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 RCE1Q9Y256 329 aa12.99□□□□□ -0.33
LIMS4-201ENST00000413601 OR6C65A6NJZ3 312 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 C11orf98E9PRG8 122 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 M0R1B8 84 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 GSTA4O15217 222 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 SLC43A1O75387 559 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 CH25HO95992 272 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 CD99P14209 185 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 AHCYP23526 432 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 GSK3BP49841 420 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 TAS2R41P59536 307 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 SELENOWP63302 87 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 ROR2Q01974 943 aaKnown RBP12.98□□□□□ -0.33
LIMS4-201ENST00000413601 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
LIMS4-201ENST00000413601 PUDPQ08623 228 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 FOXD4Q12950 439 aaPredicted RBP12.98□□□□□ -0.33
LIMS4-201ENST00000413601 PIN1Q13526 163 aaPredicted RBP12.98□□□□□ -0.33
LIMS4-201ENST00000413601 ZNF74Q16587 644 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
LIMS4-201ENST00000413601 KLHL17Q6TDP4 642 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 TMEM108Q6UXF1 575 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 NKAIN4Q8IVV8 208 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 LRRC17Q8N6Y2 441 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 WFDC11Q8NEX6 87 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 OR1K1Q8NGR3 316 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 OR5J2Q8NH18 312 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 IGFBPL1Q8WX77 278 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 FBXW5Q969U6 566 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 TXNDC15Q96J42 360 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 OR2M2Q96R28 347 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 EMC6Q9BV81 110 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 ALG2Q9H553 416 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 RIMS3Q9UJD0 308 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 AMDHD2Q9Y303 409 aa12.98□□□□□ -0.33
LIMS4-201ENST00000413601 CXCR6O00574 342 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 SERPINI2O75830 405 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 ADORA3P0DMS8 318 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 CD40P25942 277 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 PRDX6P30041 224 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 PRPS1P60891 318 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 PSME3P61289 254 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 SPOCK1Q08629 439 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 TBRG1Q3YBR2 411 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 CARD17Q5XLA6 110 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 KLHL24Q6TFL4 600 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 NHLRC1Q6VVB1 395 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 PXKQ7Z7A4 578 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 VTCN1Q7Z7D3 282 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 WDFY1Q8IWB7 410 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 TMEM123Q8N131 208 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 LRRC75A-AS1Q8N1F1 130 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 GPR137CQ8N3F9 429 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 TMEM255BQ8WV15 326 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 TMEM171Q8WVE6 324 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 LZICQ8WZA0 190 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 PERPQ96FX8 193 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 BOD1Q96IK1 185 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 SLC19A3Q9BZV2 496 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 FKRPQ9H9S5 495 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 GPR35Q9HC97 309 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 MEPEQ9NQ76 525 aaPredicted RBP12.97□□□□□ -0.33
LIMS4-201ENST00000413601 NANSQ9NR45 359 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 MED29Q9NX70 200 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 LAMP3Q9UQV4 416 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 NOX1Q9Y5S8 564 aa12.97□□□□□ -0.33
LIMS4-201ENST00000413601 TEP1Q99973 2627 aaKnown RBP12.97□□□□□ -0.33
LIMS4-201ENST00000413601 A0A096LPE4 126 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 A0A1W2PPZ6 126 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 SLC35F4A4IF30 521 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 RPL36A-HNRNPH2H7BZ11 118 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 M0R3G1 203 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 DYNC1I1O14576 645 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 AKAP8O43823 692 aaKnown RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 OR5F1O95221 314 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 OR6A2O95222 327 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 ZNF682O95780 498 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 WNT11O96014 354 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 SOD3P08294 240 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 UMPSP11172 480 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 PTAFRP25105 342 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 UGT2B15P54855 530 aa12.96□□□□□ -0.33
LIMS4-201ENST00000413601 ARF1P84077 181 aaKnown RBP12.96□□□□□ -0.33
LIMS4-201ENST00000413601 PHYHD1Q5SRE7 291 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms